| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2542 |
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| Symbol | pcrA |
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| ID | 4202456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2799922 |
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| End bp | 2802177 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083409 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_696932 |
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| Protein GI | 110800092 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA AAAGCTTGCT TAATAAAGAA CAATATGAAG CAGCAACCAC AATTGATGGT
CAAGTACTTA TATTAGCAGG AGCAGGTTCT GGTAAAACTA GAGTACTTAC ACACAGAATA
GCATACATGA TAGAAAATGA TATAAAACCT TATAATATAT TAGCAATAAC ATTTACAAAT
AAAGCAGCAG GGGAAATGAG AGAGAGAGTA AAATCTCTAG TTGGTGAAGT AGCAAACAAC
ATGTGGATAT CAACATTTCA TTCATCTTGC GTGAGAATTT TAAGAAGAGA AATAGATAAA
TTAGGGTATA GTAAAGACTT TACAATATAT GATTCATCAG ATCAGAAAAC ATTAATAAAA
CTTGTAATGA AAGAGCTTAA TATTAATGAA AAAGAGATAA CTGATTTAGA GATTTTAGGT
ACTATAGGAA AAGCAAAGGA TAATATCCAA AGTGCACAAA GTTTTAAGAA AGAAAATGAA
GATAACTTTA GAAAAAATAA AATAGCAGAT GCATATCTTT TATACCAAAA GAAATTAAAA
GAAAATAATG CCCTAGATTT TGATGATTTA ATAGTAAAAA CTGTTGAGTT ATTTAGAAAG
CATAATGATG TATTAGAGTT TTATCAAAAT AAGTTTAAAT ACATAATGAT AGATGAATAT
CAAGATACAA ATAAAGCTCA ATATGAATTT GCTAAGCTTT TAGCTGCAAA ACACAAAAAT
ATATGCGTAG TTGGTGATGA TGACCAATGT ATTTATGCTT GGAGAGGGGC AGATATAAGA
AATATATTAG ATTTTGAAAA GGATTATCCA GAGGCTAAAG TTGTTAAACT TGAGCAAAAC
TATAGATCAA AAGGAAATAT TTTAGAAGCA GCTAATAAAG TTATAAAAAA TAATGCAGAG
AGAAAATTTA AGATTTTAAG AACTGAGCAA GTAGAGGGAG AAAAAATAAG TATTCATAGA
GCTTACTCAG ATAAAATGGA GGCAGCTTTT GTTGTTTCAG AGATAGAAAA ATTAAAAAAT
GATAATGGAT ATAAGTATAA GGACTTTGCT GTTCTTTACA GAACAAATGC ACAGTCTCGT
AATTTTGAGG AAGCTTTAAG AAGAGCAGGA ATTCCATATA GAATTTTTGG AGGACTAAAA
TTCTATGATA GAAAAGAGAT AAAAGATATT CTTGCATACT TAAAAATAAT AGTAAATCCT
AAAGATTCTA TAAGTTTAAG AAGAATAATA AATGTTCCTA AAAGAAGCAT TGGAGATACT
ACTGTAGAAA AACTTCAAAA TCATGCAACT GAAATAGATG ATACATTATA CAATGTTTTA
TTAGATGTAG ACTATGTGCC AGGATTAACA GCTAGAAGCA TAAATCCTAT TAAGAAGTTT
ACTGATATGA TGGAAGAAAT AATGGTTATG TCAGAGCAAT TAAGTGTATC TCAATTAATT
GAATATGTTT TGGAAAAAAC AGGTTATTTA AAATCACTTA AAGATTCAAA GCTTATAGAG
GATCAAAGTA GAATAGAAAA CTTAGAGGAA TTAGTTTCTG ATGCTGTTGA ATTTGAAAAG
AGTAATGAAG AAGATAAATC CTTATCAGCT TACTTAGAGA AGGTTGCTCT TGTTCAAGAT
ATGGATGATT TAGAAGCAGA AGATAATTAT GTAATGCTAA TGACAGTTCA CAGCTCAAAG
GGACTAGAAT TCCCAACAGT TTTCTTAGTT GGTATGGAAA ATGGAATATT CCCAAATGCA
GCTTGCTTTG AACATGATAA TCAAATGGAA GAGGCTAGAA GACTTTGCTA TGTTGGAATA
ACTAGAGCTG AGGAAAAATT ATATATGACA TCAGCTGAAA CAAGAATGAT ATTTGGTAAA
ACAGTAGCTT ATGGACAATC AGATTTTATA TCAGAAATTC CAGCTAACAT AAAAGACTAT
GTAAATATCA ATGGGAAAAG TTCAAGTAAC TCTTTCAAAA ATAGTTCACA AACTTATGGA
GAGACTAGAA AAACTTATAA TCCTCATAGC ATTAGAGGAG GAATGAGTGC TTCTAAAGCA
AATGAATCCC TAAATAAGAC TTTATCAGGA AAATCTTCAG GTAATGCAGG AATAGATGAA
CTAACTATGG GAAGAAAAGT TAAACATCCT AAGTTTGGTG TAGGAACGTT AATAACAAAG
AGTAAAGTTG GAGATGACTA TAAGCTTACA ATTGCCTTTG ATAGTCAAGG AGTTAAACAT
TTAATGTTTA GCTTTGCACC ACTAGAGCTT CTTTAA
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| Protein sequence | MDLKSLLNKE QYEAATTIDG QVLILAGAGS GKTRVLTHRI AYMIENDIKP YNILAITFTN
KAAGEMRERV KSLVGEVANN MWISTFHSSC VRILRREIDK LGYSKDFTIY DSSDQKTLIK
LVMKELNINE KEITDLEILG TIGKAKDNIQ SAQSFKKENE DNFRKNKIAD AYLLYQKKLK
ENNALDFDDL IVKTVELFRK HNDVLEFYQN KFKYIMIDEY QDTNKAQYEF AKLLAAKHKN
ICVVGDDDQC IYAWRGADIR NILDFEKDYP EAKVVKLEQN YRSKGNILEA ANKVIKNNAE
RKFKILRTEQ VEGEKISIHR AYSDKMEAAF VVSEIEKLKN DNGYKYKDFA VLYRTNAQSR
NFEEALRRAG IPYRIFGGLK FYDRKEIKDI LAYLKIIVNP KDSISLRRII NVPKRSIGDT
TVEKLQNHAT EIDDTLYNVL LDVDYVPGLT ARSINPIKKF TDMMEEIMVM SEQLSVSQLI
EYVLEKTGYL KSLKDSKLIE DQSRIENLEE LVSDAVEFEK SNEEDKSLSA YLEKVALVQD
MDDLEAEDNY VMLMTVHSSK GLEFPTVFLV GMENGIFPNA ACFEHDNQME EARRLCYVGI
TRAEEKLYMT SAETRMIFGK TVAYGQSDFI SEIPANIKDY VNINGKSSSN SFKNSSQTYG
ETRKTYNPHS IRGGMSASKA NESLNKTLSG KSSGNAGIDE LTMGRKVKHP KFGVGTLITK
SKVGDDYKLT IAFDSQGVKH LMFSFAPLEL L
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