| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2536 |
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| Symbol | rph |
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| ID | 4201488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2791330 |
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| End bp | 2792076 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638083403 |
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| Product | ribonuclease PH |
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| Protein accession | YP_696926 |
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| Protein GI | 110799614 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0273793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAGTA GTGGAAGAAA AAAAGAACAG ATAAGACCAG TTAAAATAAC AAGAAACTTT
ACTAAATATG CAGAAGGCTC TGTATTAATA GAAGTTGGGG ATACTAAAGT ATTATGTACT
GCTTCAATAG AAGAGAAAGT TCCACCTTTT TTAAAGGGTT CTGGAGAAGG ATGGATAACT
GCTGAATATA ACATGCTTCC AAGAAGTACT CAAAGTAGAA AACAAAGAGA GATAAATAAA
CTTAAAATAG ATGGAAGAAC AATGGAAATA CAAAGACTTA TAGGAAGAGC TCTTAGATCA
GCTGTAGATA TGAAAGCTTT AGGAGAAAAA ACTATTTGGA TAGACTGTGA TGTTCTTCAA
GCTGATGGAG GAACTAGAAC GACTTCTATT ACAGGTTCAT TTGTGGCATT GGTTGATGCT
GTAAATAAAC TTCATCAAAA GAAACCTTTC AATGTTTATC CTATAAGACA TTTTGTCAGC
GCAGTAAGTG TTGGAATAGT AGGGGAAGAG AAAGTATTAG ACTTATGCTA TGAAGAAGAC
CATGTAGCTA AAGTAGATAT GAATGTTGTA ATGACAGAAG AGGGAGAATT TATAGAAATT
CAAGGAACTG GAGAGGCTGG ACCTTTTTCA AGAAAAGAAT TAGATGAATT ATTAAATCTT
GCTGAAAAGG GAGCAAAACA AATGATACAA GCACAAAAAG ATGCTTTAAA GACAGATTCT
TTATGGATCG GAACAGGGAG AGAGTAA
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| Protein sequence | MRSSGRKKEQ IRPVKITRNF TKYAEGSVLI EVGDTKVLCT ASIEEKVPPF LKGSGEGWIT
AEYNMLPRST QSRKQREINK LKIDGRTMEI QRLIGRALRS AVDMKALGEK TIWIDCDVLQ
ADGGTRTTSI TGSFVALVDA VNKLHQKKPF NVYPIRHFVS AVSVGIVGEE KVLDLCYEED
HVAKVDMNVV MTEEGEFIEI QGTGEAGPFS RKELDELLNL AEKGAKQMIQ AQKDALKTDS
LWIGTGRE
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