| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2504 |
|---|
| Symbol | |
|---|
| ID | 4203399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2777378 |
|---|
| End bp | 2778061 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083369 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | YP_696918 |
|---|
| Protein GI | 110799600 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TATTAGTAGA AGATGAAGAA AGTATAAGAG GCTTTTTAAG AATAAATTTT
CAAAGAGAAA ACTTTCAAGT TATAGAATGT GAAAGTGGAG AGGAAGGAGT AAGAAAGGCT
TTAATAGAAA AGCCAGATAT AGCAATACTT GATGTTATGT TACCTGGCAT GAATGGGTTT
GAAGTATGTC AAAAGTTAAG AGAAAGCTTT CCTAGAATGG GAATAATAAT GTTAACTGCT
AAAGGTGAAG ATATGGATAA AATCATGGGG CTTCAGTTTG GAGCAGATGA TTATGTTTTA
AAACCATTTA ATCCACTAGA GATAACTTTA AGAGTAAAAG CATTAATAAG AAGGTTAGAA
GGAATAAATG AAGAAAATAA TAGTGATTGC ATAGAAGTAG ATAATTTTAA ATTAGATTTA
TATTCTCAAA GTTTATATAA AGAAAATGTA GAAATAGATG TAACACCTAA AGAGTTTTTA
CTAATGAAAA TATTCATGCA AAACCCAGGA AAGGCCTTTA CTAGAGATGA ATTGTTGAAT
TTAGTATGGG GAATAGACTT TTTTGGAGAT CCAAAGATAG TTGATGTTAA TATAAGGAGA
TTAAGATCTA AAATAGAAGA AAACTCTTCA AAACCTAAAT ACATAGAAAC TGTATGGGGA
ACAGGATATA GGTGGAAGAG ATAA
|
|---|
| Protein sequence | MKILLVEDEE SIRGFLRINF QRENFQVIEC ESGEEGVRKA LIEKPDIAIL DVMLPGMNGF
EVCQKLRESF PRMGIIMLTA KGEDMDKIMG LQFGADDYVL KPFNPLEITL RVKALIRRLE
GINEENNSDC IEVDNFKLDL YSQSLYKENV EIDVTPKEFL LMKIFMQNPG KAFTRDELLN
LVWGIDFFGD PKIVDVNIRR LRSKIEENSS KPKYIETVWG TGYRWKR
|
|---|
| |