| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2499 |
|---|
| Symbol | |
|---|
| ID | 4203519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2770468 |
|---|
| End bp | 2771430 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638083364 |
|---|
| Product | pyridine nucleotide-disulfide family oxidoreductase |
|---|
| Protein accession | YP_696913 |
|---|
| Protein GI | 110799776 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATA TTTTATGTGA GTATGATGTT GTAGTTGTTG GTGGCGGAAT AAGTGGAATG
GCAGCAGCTA TAAGATCAAA AGAAAATGGC ATAGGAAAGG TTCTGCTTCT TGAAAGAGAA
GATGTTTTAG GTGGAGTTTT AAATCACTGC ATACATTGCG GCTTTGGAAA AGAAATTTTA
GGAGAAGCTG TTACTGGAAG TGAATTTGTA GAGTACTTAG TTGATAAAGT TCATAAGCTA
GGTATAGATG TTAAATTAAA TACTACTGTA TTAGAGATAA GTAAAGATAA AGAAATAAGT
TATGTTAATC CAGATGAAGG TATGAAAAAG ATGAAAACTA GGGCAATAGT TTTATCTACT
GGAAGTAGAG AAAAATTTAA GGGAAATGTA AGTGTTCCTT TAAATAAATT TACAGGTATA
TATACTTCAG GAACTGCTCA CAGATTTATA AATCTTTATG GTTATCTTCC AGGGAAAAAG
ATAGTTATAA TAGGTTCACA TGATAGTGAT ATGATTGTAG CTAGAAGGCT TATTATAGAG
GGGGCTAAAG TAGAAGCAAT AATTGAAAGT AAGGATTATT TAAATTCTTC TCAATATATT
GTTGAAAATA TAATTGAGGC CTTTGATATT CCTGTTAAAC TTGGATATAC AGTAAATGAA
GTTTTAGGTA CTGAAAGAGT AGAGGGAGTA ATTATAAGCA AAGGTGGAGA AGAGGAAAGT
TTTATAAAAT GTGATTCACT TTTAATATCA GTTCCATGGA TACCAGAAAG TGCTTTAGGT
AAAAAGATGG GATTAAGAAT ATCTAATAGT AGCGAAACTA TTTTAGTAAA TGAAAACTTT
GAAACATCAG AAGGTGGAAT ATTTGCTTGT GGAAATGTTC TGCATGCCTA TGAACTATCT
GACTTAGCAA CAAAAGAAGG ATTTAAAGTT GGAGATGCCA TTAAAGAGTA TCTTGAAAAT
TAA
|
|---|
| Protein sequence | MENILCEYDV VVVGGGISGM AAAIRSKENG IGKVLLLERE DVLGGVLNHC IHCGFGKEIL
GEAVTGSEFV EYLVDKVHKL GIDVKLNTTV LEISKDKEIS YVNPDEGMKK MKTRAIVLST
GSREKFKGNV SVPLNKFTGI YTSGTAHRFI NLYGYLPGKK IVIIGSHDSD MIVARRLIIE
GAKVEAIIES KDYLNSSQYI VENIIEAFDI PVKLGYTVNE VLGTERVEGV IISKGGEEES
FIKCDSLLIS VPWIPESALG KKMGLRISNS SETILVNENF ETSEGGIFAC GNVLHAYELS
DLATKEGFKV GDAIKEYLEN
|
|---|
| |