Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2498 |
Symbol | |
ID | 4201111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 2769771 |
End bp | 2770331 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638083363 |
Product | putative acyl-CoA thioesterase |
Protein accession | YP_696912 |
Protein GI | 110798988 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATAA TTTGTATAGG TGACTCTCTT ACCTTTGGCT ATGGTGTAGG ACAAGAAAAT TCTTGGGTTT CTCTTTTAAA TGATGAAAAA AACAAATTCA TAAACAAAGG GGTTAATGGT GACACTTCAA CTGGTATTTT ATCTAGAATA TATGAAATCT TAAAATCAAG TGATTCTAAG ATTTGTTTAA TTATGTGTGG CTCAAATGAT ATTATAATGA ATAAATCTAT TAGTTCAATT ATTGATAATA TAAGGTTAAT GACTGATGAT TGTAATTCAC TTAATATAAA ACCAATAATT TTATCTCCGC CTAAAATATA TGGTGATTTA GCTATTAAAA GGTGGGATTC TTCTATTGAT TATGAAAAAT GTAATTCTAA GCTAGAGAAT TATACTAGAG AATTAAATTT ATTCTGTGAA AAAAACAATT TGTTATTTAT AGACTTAAAC TCTAATCTTC CTTTTGATTC TTTAAATTAT ACTGATGGAT TGCACTTAAG CATAAAAGGA AATATATTAG TATCTAACTT AGTAAAAATG AGTTTAAAAA ATTATCTTTA A
|
Protein sequence | MNIICIGDSL TFGYGVGQEN SWVSLLNDEK NKFINKGVNG DTSTGILSRI YEILKSSDSK ICLIMCGSND IIMNKSISSI IDNIRLMTDD CNSLNIKPII LSPPKIYGDL AIKRWDSSID YEKCNSKLEN YTRELNLFCE KNNLLFIDLN SNLPFDSLNY TDGLHLSIKG NILVSNLVKM SLKNYL
|
| |