Gene CPF_2496 details

Gene Information

• Locus tag: CPF_2496
• Symbol: gcp
• ID: 4201125
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2767969
• End bp: 2768988
• Gene Length: 1020 bp
• Protein Length: 339 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638083361
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: YP_696910
• Protein GI: 110798788
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA AAATTATATT AGCAATAGAA AGTAGTTGTG ACGAAACAGC GGCAGCTGTA 
GTAGTCAATG GTAGAGAAGT TTTATCAAAT ATAATATCTT CTCAGATAGA TATACATACA 
AAATTTGGTG GAGTAGTTCC AGAGGTTGCA TCAAGAAAAC ACATAGAAGC TATAAATGCA 
GTAGTAGAGG AAGCCTTAGA AGTTGCAGGA GTAACATTTG ATGACATAGA TGCAATAGCA 
GTTACATATG GTCCTGGTTT AGTTGGAGCA CTTTTAGTAG GACTTCAATA TGCTAAAGGA 
TTAGCATACT CTTTAGATAA ACCATTAATA GGAGTTAACC ATATAGAAGG GCATATAAGT 
GCTAACTTTA TAGATCATAA AGACTTAGAA CCACCTTTTG TTTGTTTAGT TGTTTCAGGA 
GGACACACTT TTGTAGTCCA TGTTGAAGAC TATGGAAAGT TTGAAATAAT AGGTGAAACA 
AGAGATGATG CAGCAGGAGA AGCTTTTGAC AAGGTAGCAA GAGCCGTAGG ATTAGGATAT 
CCAGGAGGAC CTAAAATAGA TAAATTAGCT AAGGAAGGAA ATAGTGATGC TATAAAATTC 
CCAAAAGCTA ATTTCCATGA TGATACCTTA GATTTTTCAT TTAGTGGAGT TAAATCAGCT 
GTATTAAATT ATCTAAATAA GATGGAAATG AAAAATGAAG AAATAAATAA AGCTGATGTT 
GTAGCTAGTT TCCAAAAGGC CGTAGTTGAA GTATTAACTG ATAATGCAAT AAAAACTTGT 
AAGATGAGAA AGGCAGATAA AATAGCCATT GCAGGTGGAG TTGCTTCTAA TAGTGCTTTA 
AGAGAAAATC TTCTTAGAGA AGGAGAAAAG AGAGGAATAA AGGTTTTATT CCCATCACCA 
ATACTTTGTA CAGATAATGC TGCCATGATA GGAAGTGCTG CATATTTTGA ATTATTAAAG 
GGAAATGTAT CTGAAATGAG TCTTAACGCA AAACCTAATT TAAGATTAGG AGAAAGATAG 

 

Protein sequence

MDKKIILAIE SSCDETAAAV VVNGREVLSN IISSQIDIHT KFGGVVPEVA SRKHIEAINA 
VVEEALEVAG VTFDDIDAIA VTYGPGLVGA LLVGLQYAKG LAYSLDKPLI GVNHIEGHIS 
ANFIDHKDLE PPFVCLVVSG GHTFVVHVED YGKFEIIGET RDDAAGEAFD KVARAVGLGY 
PGGPKIDKLA KEGNSDAIKF PKANFHDDTL DFSFSGVKSA VLNYLNKMEM KNEEINKADV 
VASFQKAVVE VLTDNAIKTC KMRKADKIAI AGGVASNSAL RENLLREGEK RGIKVLFPSP 
ILCTDNAAMI GSAAYFELLK GNVSEMSLNA KPNLRLGER