Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2494 |
Symbol | |
ID | 4203306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2765439 |
End bp | 2766818 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638083359 |
Product | serine protease |
Protein accession | YP_696908 |
Protein GI | 110801229 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT TCAATAAAAA AGATGAAAAC TTAAATGACT ACTTTGGTTT TGATGATAAA GAAAATAAAA CTTTAGATTC AGATAAGGAC ATAAAAGACA AAGAAAATAT AGAGTCAAAT AATGATACGA AGCAAACTAA CATAGATGAA ACTCAGCAAT TAAATATAGA TAATGAAATT AATTCAAAAG ATGAAGTTAA AAAAGAGGAT GATAAAAACT TCTCTGACGT AAAATCAAAA AGCTCAAAAG AATCTAATGA TAATAGTAAA AACAAAAAAG TAAAGAAAAA GAGTGGATTT AAAAGAGGAA TAGCTCTAGT AGCAGGTGCT GTCATAGTTG CTATAATAGG AGGAGCTATA GGTGCTGGCG GAGTTTATTA TGCTTTTAAA AATAGCATAC CAGTAAGTAC ACTAGAGAAT AATAGTAATA CCTCAGTTAA TCCACCAGCC TTTAAAGGGG AAGATGGAGC ATTAACTGTT CCACAAGTAG TTGAAAAAGT TACACCTGCC GTTGTAGGAG TATCCACAAA GAGCTTAGTA AGAGACCAAT TCTTTAATGT AAAAGAACAA GAAGGATTAG GATCTGGATT TATAATAAAT GAAGATGGAT ATGTAGTTAC AAATTACCAT GTTATAAATG GAGCTCAAGA AGTTAAAGTA ATATTCTCTG ATGGAAAAGA AGTAAATGCT AAGGTTGTAA ATTACGATGC AGAAAGAGAT ATCGCAGTAA TAAAAATAAC AGACGATGTT AAAATGCCTG GAATAGCACA ATTAGGAGAT TCATCTACAG TTAAAGCTGG TGAAGAAGTA ATTGCTATAG GAAATCCTCT AGGAAAAGAA TTTAGTTCAA CAGTAACTAA GGGTATAGTA AGTTCACCAA ATAGAAAGAT GAAGACTGAA AACGGAAATG TATTAGATTA TATACAAACA GATGCAGCTA TTAACCCTGG TAATAGTGGT GGTCCATTAA TAAACTCTAA GGGAGAAGTT ATTGGAATAA ACACTGCTAA AAAAGTTGGT GAAGATATTG AAGGTATAGG ATTTGCAATT CCTATAAATG AAGTTAAAAC AAGATTAGGT TCATTATCAA AGCCAATATT AAAACTTGGT ATTACAGCTA GAACTGTTAC TCCAGAATTA GCAAAAGAAA ATAAGCTAGA AGAAGGAGTT TATGTTGTAG GAGTACAAGA GTTTAGTCCA GCAGAAAAAG CAGGATTAAA AATAGGTGAC TTAATAGTTG AATTTGGTGG AAAAAGAGTA AAAACTTTAG AAGAATTAAA TCAAGTTAAA AGTCAATATA ATGATGGAGA TTCAGTACCA GTTGAAATAA TTAGAGATGG TAAGAAAGTA AACTTAAATT TAACATTAGT TGCTAATTAG
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Protein sequence | MSDFNKKDEN LNDYFGFDDK ENKTLDSDKD IKDKENIESN NDTKQTNIDE TQQLNIDNEI NSKDEVKKED DKNFSDVKSK SSKESNDNSK NKKVKKKSGF KRGIALVAGA VIVAIIGGAI GAGGVYYAFK NSIPVSTLEN NSNTSVNPPA FKGEDGALTV PQVVEKVTPA VVGVSTKSLV RDQFFNVKEQ EGLGSGFIIN EDGYVVTNYH VINGAQEVKV IFSDGKEVNA KVVNYDAERD IAVIKITDDV KMPGIAQLGD SSTVKAGEEV IAIGNPLGKE FSSTVTKGIV SSPNRKMKTE NGNVLDYIQT DAAINPGNSG GPLINSKGEV IGINTAKKVG EDIEGIGFAI PINEVKTRLG SLSKPILKLG ITARTVTPEL AKENKLEEGV YVVGVQEFSP AEKAGLKIGD LIVEFGGKRV KTLEELNQVK SQYNDGDSVP VEIIRDGKKV NLNLTLVAN
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