Gene CPF_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2493 
Symbol 
ID4201821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2764880 
End bp2765209 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content27% 
IMG OID638083358 
ProductPTS system, lactose/cellobiose-specific IIB component 
Protein accessionYP_696907 
Protein GI110800389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1440] Phosphotransferase system cellobiose-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TAGTATTATT ATGTACACTA GGAATGTCTA CATCTTTATT AGTTTCTAAA 
ATGAGAAAAG CTGCAAAGGA ATTAGGAATT GATTGTTCTA TAGTTGCAAT AGGAGAATAT
GAGCTTAAAA AATATGAAAA AGAGGCAGAT ATAATAATGT TAGGGCCTCA AGTAAGGTAT
TTATTTAATA GTTTAAGAAA AAAAGTAGAT AGTAATATAC CAATAACTCT TATAAATAGT
GCAGATTATG GAACTATGAA TGGGAATAGG ATTTTAAATC AAGCCTTAGC ACTAATGGAT
AATAAGGAAT TATCCACAAA TAATTTGTAA
 
Protein sequence
MKKVVLLCTL GMSTSLLVSK MRKAAKELGI DCSIVAIGEY ELKKYEKEAD IIMLGPQVRY 
LFNSLRKKVD SNIPITLINS ADYGTMNGNR ILNQALALMD NKELSTNNL