Gene CPF_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2484 
Symbol 
ID4203272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2756479 
End bp2757507 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content23% 
IMG OID638083349 
Productputative spore coat protein 
Protein accessionYP_696898 
Protein GI110799397 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID[TIGR02906] spore coat protein, CotS family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0028881 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA TTAGATATAA AGATGAGAAA TATTTATGTA GATATGATCT AGATATTAAA 
TTATTTGAAG CTTTAGGACT AGATATATTT GATTTAAGAC CAAATAGAAA TGTATTTTTA
TTAGATACAA AGCAAGGTAA GAAGATTTTA AAGATGATAA ATTATGATGA TGACAGATTA
AACTTCATAA TCCATTCAAC AGAGTACTTA AGGGAAAGAT ATGATAGTAT ATTAAAAATA
AATAAGCTTC CAAATGGAGA GTGGAGATTT AAGTGGAAGG GAAATGATTA TATATTATTA
GACTACTTTG AAGGAACTGA ATTTAATATA GCTAATCCAA TAGAATTAGA AATAATAACA
GAGGCAGTAG CTAAACTTCA TAATGCGGGA ATGGGAATTC AAGAGGCTAC TTCAAAGGAA
ATGAATGAAA AAAATAGTGA GCTTTTTAAG TTAAAAGATT ATTTTAAAAA TAGTAAAAAA
GATTTAGAAC GACTAAATGA AATAGTAGAG AGCTATAAGT ATAAAAATGA ATTTGATGAA
ATCTTTATAA AAGAAGTAGA TTATCATTTA AGTGATGTAG AGAAATGTAT AGATTTATTA
GAAAAGAGTA AATATGAGGA CTTATGTAGA GATAAAGAAA AAATAACTTT ATGTCATAAT
GATCTTGCCT ATCATAATAT ATTATTTAAT CAAAATAAGG TAAGCTTTAT AGACTTTGAT
TATTGCAATA TAAATTTAAG GGTTATAGAC TTATGTAATT TTATAATTAA GAGTATAAAA
AGATTTGGAT TTAGTTTAGA AATGTATGAT TCAATTATAG AAAAGTATGA TAAGTTAAAT
AACTTATCAA AGGAAGAAAA AGAGTTAATG TATATATATT TAAGATTCCC TCATGATTTT
TATACTGTTT CAATGCAATA TTATTATAAA TTAAAGGATT GGAAATATGA GTCATTCTTA
AATAAATTAG AGAGAAAATT AGAGTACACA AAGGAAAAGG AAATTTTATT AAATCATATA
AATAAATAA
 
Protein sequence
MNKIRYKDEK YLCRYDLDIK LFEALGLDIF DLRPNRNVFL LDTKQGKKIL KMINYDDDRL 
NFIIHSTEYL RERYDSILKI NKLPNGEWRF KWKGNDYILL DYFEGTEFNI ANPIELEIIT
EAVAKLHNAG MGIQEATSKE MNEKNSELFK LKDYFKNSKK DLERLNEIVE SYKYKNEFDE
IFIKEVDYHL SDVEKCIDLL EKSKYEDLCR DKEKITLCHN DLAYHNILFN QNKVSFIDFD
YCNINLRVID LCNFIIKSIK RFGFSLEMYD SIIEKYDKLN NLSKEEKELM YIYLRFPHDF
YTVSMQYYYK LKDWKYESFL NKLERKLEYT KEKEILLNHI NK