Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2484 |
Symbol | |
ID | 4203272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2756479 |
End bp | 2757507 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 638083349 |
Product | putative spore coat protein |
Protein accession | YP_696898 |
Protein GI | 110799397 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | [TIGR02906] spore coat protein, CotS family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0028881 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGA TTAGATATAA AGATGAGAAA TATTTATGTA GATATGATCT AGATATTAAA TTATTTGAAG CTTTAGGACT AGATATATTT GATTTAAGAC CAAATAGAAA TGTATTTTTA TTAGATACAA AGCAAGGTAA GAAGATTTTA AAGATGATAA ATTATGATGA TGACAGATTA AACTTCATAA TCCATTCAAC AGAGTACTTA AGGGAAAGAT ATGATAGTAT ATTAAAAATA AATAAGCTTC CAAATGGAGA GTGGAGATTT AAGTGGAAGG GAAATGATTA TATATTATTA GACTACTTTG AAGGAACTGA ATTTAATATA GCTAATCCAA TAGAATTAGA AATAATAACA GAGGCAGTAG CTAAACTTCA TAATGCGGGA ATGGGAATTC AAGAGGCTAC TTCAAAGGAA ATGAATGAAA AAAATAGTGA GCTTTTTAAG TTAAAAGATT ATTTTAAAAA TAGTAAAAAA GATTTAGAAC GACTAAATGA AATAGTAGAG AGCTATAAGT ATAAAAATGA ATTTGATGAA ATCTTTATAA AAGAAGTAGA TTATCATTTA AGTGATGTAG AGAAATGTAT AGATTTATTA GAAAAGAGTA AATATGAGGA CTTATGTAGA GATAAAGAAA AAATAACTTT ATGTCATAAT GATCTTGCCT ATCATAATAT ATTATTTAAT CAAAATAAGG TAAGCTTTAT AGACTTTGAT TATTGCAATA TAAATTTAAG GGTTATAGAC TTATGTAATT TTATAATTAA GAGTATAAAA AGATTTGGAT TTAGTTTAGA AATGTATGAT TCAATTATAG AAAAGTATGA TAAGTTAAAT AACTTATCAA AGGAAGAAAA AGAGTTAATG TATATATATT TAAGATTCCC TCATGATTTT TATACTGTTT CAATGCAATA TTATTATAAA TTAAAGGATT GGAAATATGA GTCATTCTTA AATAAATTAG AGAGAAAATT AGAGTACACA AAGGAAAAGG AAATTTTATT AAATCATATA AATAAATAA
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Protein sequence | MNKIRYKDEK YLCRYDLDIK LFEALGLDIF DLRPNRNVFL LDTKQGKKIL KMINYDDDRL NFIIHSTEYL RERYDSILKI NKLPNGEWRF KWKGNDYILL DYFEGTEFNI ANPIELEIIT EAVAKLHNAG MGIQEATSKE MNEKNSELFK LKDYFKNSKK DLERLNEIVE SYKYKNEFDE IFIKEVDYHL SDVEKCIDLL EKSKYEDLCR DKEKITLCHN DLAYHNILFN QNKVSFIDFD YCNINLRVID LCNFIIKSIK RFGFSLEMYD SIIEKYDKLN NLSKEEKELM YIYLRFPHDF YTVSMQYYYK LKDWKYESFL NKLERKLEYT KEKEILLNHI NK
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