| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2471 |
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| Symbol | rho |
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| ID | 4203781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2740270 |
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| End bp | 2741739 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083336 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_696885 |
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| Protein GI | 261876159 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.94389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTTAAAT TGAATATAGA ACAATATGAA AATATGACTT TAGTTCAGCT AAAAGAGCAG
GCTAAAGAAT TAGGAATAAA AAATATAAGT AAAAAGAAAA AAAGCGAATT AATTGAGGAA
TTAAAAGCTG AATTCAATAA ACAAAATAGC AATACTAAAG TAATACATAA AGATGGTGTT
ATTTTAAGAG AAAAAATATC TCAAAAAGAG CAAGGTGGAA ATAAAGAAAG TTTTTCTGGT
GAAAGAGTAG TTAGAAATAG CAATAATTAT AATAACAATA ATAGTAATTA TAATAATTCA
AATGATGAAG GAAAAAAAGA GCAATTAAAG GACATGATAA GTTCATCAGA CTCTGCTAAG
GGAATACTTG AAATACTAGA TAATAATAAT TTTGGTTTTT TAAGATGTAG AAATTATTTA
ACAAGTGAAG ATGATATATA TGTTTCTCCA TCACAAATAA GAAGATTTGG ATTAAGAACT
GGGGACGAAG TCCAAGGTAA AGTTAGAATA CCAAAGGATG GAGAAAAGTT TAAAGCTTTA
CTTTATGTAG AGAGAGTAAA TGGTGAAAGT CCTGAAAAAG CAGTTGGAAG AAAAAAATTT
GAAGAGTTAA CACCAATATA TCCAAAAGAG AGATTAAGAC TTGAGACTGA AAATGGAAGA
GATTTAAGTT CAAGACTTAT GGATATAATT TGTCCAATAG GTAAGGGACA AAGGGGGATG
ATAGTTGCAC CACCTAAGGC TGGAAAAACA ACTCTTTTAA AAAGAATAGC TCAAAACATA
TCAAAAAATA ATCCTGAAGT TAAACTTATA GTACTTTTAA TAGATGAAAG ACCAGAAGAA
GTAACGGATA TGAAGAGAAG TATAGATGGA GAAGTAATCT ATTCAACTTT TGATGAAGAA
CCACAAAACC ATGCTAAAGT TTCAAGTATA GTATTAGAAA GAGCTAAAAG AATGGTTGAA
CAAGGAAGAG ATGTAGTTAT CTTAATGGAT TCTTTAACAA GATTATCAAG AGCCTATAAC
TTAACAGTTA CTCCATCTGG AAGAACTTTA TCAGGGGGAC TAGATCCAGG GGCACTTATA
ATGCCTAAGA AATTCTTTGG AGCAGCTAGA AATTTAGAAG AGGGCGGAAG TTTAACAATT
TTAGCAACTT CTTTAGTTGA TACAGGAAGT AGAATGGATG ATATGATTTT TGAAGAGTTT
AAGGGTACTG GAAATATGGA GGTACACTTA GATAGAAAGC TTCAAGAGAG AAGAATATTC
CCAGCTATAG ATATTTATAA ATCTGGTACT AGAAAAGAAG ATTTATTATT TAATGAAGAA
GAAAGAGAAG CTTCATATAA AATAAGAAGA GTATTACAAA AGGAAAATAA TATAGAGGAT
GTAGCTGAAA AGCTTATAAA TTTATTATCA AAAACAAAAA ATAATAAAGA GTTTTTACAA
GTTGTTTTAA AAAGCAATTT AGAAAATTAA
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| Protein sequence | MLKLNIEQYE NMTLVQLKEQ AKELGIKNIS KKKKSELIEE LKAEFNKQNS NTKVIHKDGV
ILREKISQKE QGGNKESFSG ERVVRNSNNY NNNNSNYNNS NDEGKKEQLK DMISSSDSAK
GILEILDNNN FGFLRCRNYL TSEDDIYVSP SQIRRFGLRT GDEVQGKVRI PKDGEKFKAL
LYVERVNGES PEKAVGRKKF EELTPIYPKE RLRLETENGR DLSSRLMDII CPIGKGQRGM
IVAPPKAGKT TLLKRIAQNI SKNNPEVKLI VLLIDERPEE VTDMKRSIDG EVIYSTFDEE
PQNHAKVSSI VLERAKRMVE QGRDVVILMD SLTRLSRAYN LTVTPSGRTL SGGLDPGALI
MPKKFFGAAR NLEEGGSLTI LATSLVDTGS RMDDMIFEEF KGTGNMEVHL DRKLQERRIF
PAIDIYKSGT RKEDLLFNEE EREASYKIRR VLQKENNIED VAEKLINLLS KTKNNKEFLQ
VVLKSNLEN
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