Gene CPF_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2468 
Symboltdk 
ID4203803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2738033 
End bp2738632 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content29% 
IMG OID638083333 
Productthymidine kinase 
Protein accessionYP_696882 
Protein GI110800423 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0799997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAT TATATTTTAG ATACGGAGCT ATGAATTCAG GTAAATCTAC ACACCTTATG 
CAAGTAGCAC ATAACTATGA GGAAAGAGGT ATGGAAGTTA TAATAATTAA ACCATCTACT 
GATAAAAAAG GTGGAGATAA GGTTGTTTCA AGACTAGGTG TTGAGAGAGT TGTAGATATT 
TTAATAGATA ATGATGAGAA TATTATAGAA ACAATTGAAG ATAGACTTGA AAAAGGAAGA 
AAAATAGATT GTATAATAGT TGATGAAGTT CAATTTTTAA AAGCTCATCA CATAGATGAA 
TTATTTGAAA TTGCAGTTGG TAAGGGAATA CCAGTAATTT GTTACGGATT AAGAACAGAC 
TTCCAAATGA ATGGGTTTGA AGGAAGTGAA AGACTTTTAT TATTAGCACA TAGTATAGAA 
GAAATGAAAA CTATATGTAG ATGTGGAAGA AAAGCTATAT TAAATGGAAG AATGATAAAT 
GGAAAGTTCA CATTTGAAGG AGAACAAGTG GCTATAGATT TAGTTGATAA TGTAGAATAT 
CAATCTCTAT GTGGACAATG CTATTTTAAA TATAAATATG GTAAGGATTC TGATAAGTAG
 
Protein sequence
MSKLYFRYGA MNSGKSTHLM QVAHNYEERG MEVIIIKPST DKKGGDKVVS RLGVERVVDI 
LIDNDENIIE TIEDRLEKGR KIDCIIVDEV QFLKAHHIDE LFEIAVGKGI PVICYGLRTD 
FQMNGFEGSE RLLLLAHSIE EMKTICRCGR KAILNGRMIN GKFTFEGEQV AIDLVDNVEY 
QSLCGQCYFK YKYGKDSDK