Gene CPF_2463 details

Gene Information

• Locus tag: CPF_2463
• Symbol: rpiB
• ID: 4201818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2732648
• End bp: 2733097
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 638083328
• Product: ribose-5-phosphate isomerase B
• Protein accession: YP_696877
• Protein GI: 110800386
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAG CAATTGGTTG TGATCATGGT GGATTTAATT TAAAAAACAC AGTGATAAAA 
CATTTAGAAG AAAAAGGTAT TGAGGTAAAA GATTTTGGTA CATACAGCAC AGATTCTTGT 
GATTACCCTG ATATATCTAT ACAGGTTGCA GAAGCTGTAG CTAAAAAAGA ATTTGAATAT 
GGTATATTAA TCTGCGGAAC TGGTATAGGA ATATCTATAG CAGCAAATAA AGTGCCAGGA 
ATAAGAGCAG CATTATGTTC TGATACATTT AGTGCTCATG CAACAAGACA ACATAACAAT 
GCAAATATTC TAGCTATGGG TGAGAGAGTT GTAGGACCAG GATTAGCGTT AGATATAGTT 
GATACTTTCT TAAATTCAGA ATTTGAAGGT GGAAGACACC AAAATAGAAT AGATAAAATA 
ACAGCTATTG AAGAAAAGTA TTCAAAATAA 

 

Protein sequence

MKIAIGCDHG GFNLKNTVIK HLEEKGIEVK DFGTYSTDSC DYPDISIQVA EAVAKKEFEY 
GILICGTGIG ISIAANKVPG IRAALCSDTF SAHATRQHNN ANILAMGERV VGPGLALDIV 
DTFLNSEFEG GRHQNRIDKI TAIEEKYSK