Gene CPF_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2462 
Symbolupp 
ID4201005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2731974 
End bp2732603 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content33% 
IMG OID638083327 
Producturacil phosphoribosyltransferase 
Protein accessionYP_696876 
Protein GI110801145 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG TAACAGAAAT AACACATCCA CTTATATTAC ATAAGTTAGC GTTTATAAGA 
GATAAAAATA CAGGGTCTAA GGATTTTAGA GAACTAGTAA GTGAAGTTTC TATGCTTATG 
GCTTATGAGG TAACAAGAAA TCTTCCTATG GAAGAAATAG AAATAGAAAC TCCAGTTTGT 
AAAACTAAAT GTAAAGTTTT AGCTGGTAAA AAAGTTGCTA TAGTTCCAAT ATTAAGAGCA 
GGATTAGGTA TGGTAGATGG TATGCTACAA CTTATTCCAG CAGCAAAAGT AGGGCATATA 
GGATTATACA GAGATGAAGA AACTCTTCAA CCTGTAGAAT ATTTCTGTAA GTTACCACAA 
GACATAGCTG AAAGAGATGT AATAGTTGTT GATCCAATGT TAGCTACAGG TGGTTCAGCT 
GCAGATGCTA TAACTCTTTT AAAGAAAAGA GGAGCTAAGC AAATAAGACT TATGTGTTTA 
ATTTCTTCAC CAGAAGGAAT AGAGTTTGTA CAAAAAGCTC ATCCAGATGT TGATATATAT 
GTTGCATGTA TTGATGAGAA ATTAAATGAT CATGGATATA TCGTTCCTGG ATTAGGTGAT 
GCAGGAGATA GACTATTTGG AACAAAATAG
 
Protein sequence
MSKVTEITHP LILHKLAFIR DKNTGSKDFR ELVSEVSMLM AYEVTRNLPM EEIEIETPVC 
KTKCKVLAGK KVAIVPILRA GLGMVDGMLQ LIPAAKVGHI GLYRDEETLQ PVEYFCKLPQ 
DIAERDVIVV DPMLATGGSA ADAITLLKKR GAKQIRLMCL ISSPEGIEFV QKAHPDVDIY 
VACIDEKLND HGYIVPGLGD AGDRLFGTK