| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2448 |
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| Symbol | spoIID |
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| ID | 4201785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2718621 |
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| End bp | 2719643 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638083313 |
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| Product | stage II sporulation protein D |
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| Protein accession | YP_696862 |
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| Protein GI | 110798809 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG2385] Sporulation protein and related proteins |
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| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain
[TIGR02870] stage II sporulation protein D |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAATA GAAAAATTTT AGAATCAGTA ATTTTTATTG TAACAATTAT AGTGAGTATA
GTTTTTATAC CAATACTTTT TGGTTTTTTA TCTAGTTCAA GTATGGCTGA AAGTAATAAT
AAAGTAGAGA AAGTTAAAAA TAAAAAGTTA GTTGATGTAG TTAACTTAAA GGAAGTTGAA
GTTTACATAT CTAAAGAAAA TAAAGTGGAA AAAGTACCAT TAGAGGAATA TGTCTTATCT
GTAGTTTCAA GTGAAATGCC AGCTACTTTT CATGAAGAGG CATTGAAAGC TCAGTCTATT
TTAGCAAGGA CATTTGTTAT AAATAAATTA ATTACTGGAT GTAACAATAT AAAGGAAGGA
AATATATGTG ATACTACTCA TTGTCAAGCA TATTTAAATA TTAATGAAAA GAAAAAAGCT
TGGGGTAAAG ATGGGGATGA ATATTTAAAA AAATTAAAAA AAGTTGTTAA AGAAACAGAG
GGGAAAGTTC TATCATATAA TGATCAGTTA GTAAAATATC CTCAATATTT TTCTACAAGT
TCAGGAAATA CAGAGGATGC AGTTGCTGTA TTTTCAGAAG ATGTACCTTA CTTAAAGTCA
GTTGAAAGTC CAGGGGAAGA AATATCACCT AAATATGAGA GTGAAATCAG TATTTCTATA
AGTGATTTTA AGAGTAAAAT TAAAAAATCT ATTCCTAATA GTGATTTAGG AAATAATATA
ACTGAAGAAG TTAAAATATT AAATAGGAAC ACAGGAGGAA CTGTAAATGA CATAAAAATA
GGGGAAGCTA CCATTAAGGG GAAGGAATTT AGAAAAATAT TTGGACTAAA TTCTGCCAAT
TTTACATTGG AAGTTTTAGA TGACAACATA AAAATAAAAT GTTTAGGATA TGGACATGGT
GTTGGCATGA GTCAATGGGG AGCTAATGTA ATGGCAAAGG AAGGCAGTAA ATATGATGAA
ATATTAGAAC ATTATTTTAA AGGAAGTAAA ATTGAAGAAA GTAATAAAAT TTTAATAGAG
TAA
|
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| Protein sequence | MINRKILESV IFIVTIIVSI VFIPILFGFL SSSSMAESNN KVEKVKNKKL VDVVNLKEVE
VYISKENKVE KVPLEEYVLS VVSSEMPATF HEEALKAQSI LARTFVINKL ITGCNNIKEG
NICDTTHCQA YLNINEKKKA WGKDGDEYLK KLKKVVKETE GKVLSYNDQL VKYPQYFSTS
SGNTEDAVAV FSEDVPYLKS VESPGEEISP KYESEISISI SDFKSKIKKS IPNSDLGNNI
TEEVKILNRN TGGTVNDIKI GEATIKGKEF RKIFGLNSAN FTLEVLDDNI KIKCLGYGHG
VGMSQWGANV MAKEGSKYDE ILEHYFKGSK IEESNKILIE
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