| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2429 |
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| Symbol | secA |
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| ID | 4201799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2703566 |
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| End bp | 2706088 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638083294 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_696850 |
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| Protein GI | 110799230 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTAT TTGATAAAAT ATTTGGAAGT TATAGCGATA GAGAAGTTAA AAGAATAACA
CCTATTGTAG ACAAAATAGA TTCGCTTGGG CCTGAAATGG AAAAACTATC TGATGAAGAA
TTAAAGCAAA AAACATTTGA ATTTAAGGAT AGATATGCTA AAGGAGAAAG CTTAGATGAT
ATGCTTCCAG AAGCTTTTGC TGTTTGTAGA GAAGCGTCAA CAAGAGTTTT AGGAATGAAA
CACTATAGAG AGCAATTAAT TGGGGGTACA GTGTTACACC AAGGAAGAAT AGCAGAAATG
AAAACTGGTG AAGGTAAAAC ATTAGTTGCT ACTTTACCTG TTTATTTAAA TGCTATAGCT
GGTAAAGGTG TTCATGTAAT TACAGTTAAT GATTATCTTG CAACAAGAGA TAAAGAGTGG
ATGGGTCAAT TATATGAATT CTTAGGATTA ACTACTGGGG TTATAGTTCA TGGATTAACT
AATGATCAAA GAAGAGAAGC ATATAATGCA GATATAACTT ATGGAACAAA TAATGAGTTT
GGATTCGATT ATTTAAGAGA TAACATGGTT ATTTACAAAG AAGAAAGAGT TCAAAGACCA
TTACACTACT GTATAGTGGA TGAGGTTGAC TCAATTCTTA TAGATGAAGC AAGAACTCCT
CTTATAATTT CAGGTGCAGG AAGTAAATCA ACAGATCTTT ATAAGATAGC TGATTTCTTC
GTTAAGAAAT TAAGAGAAGA AGAAGATTAT ACAATAGATG AAAAAGCACA TGCTGCAATG
CTTACTGATA AAGGGGTTGC AGAGGCAGAA AAGGCTTTTG GAATAGAAAA CTACGCAGAT
GCTAATAACA TGGAATTACA ACATCATATT ACTCAAGCCT TAAAAGCTAA CTATGTAATG
AAGAGAGATA AAGATTACAT GGTTAAAGAT GATGAAATAG CTATAGTCGA TGAATTTACA
GGAAGACTTA TGGAAGGTAG AAGATACTCA GATGGTCTTC ACCAAGCTAT TGAAGCTAAG
GAAGGTGTTA AAGTTCAAAG AGAATCTAAG ACTTTAGCAA CTATAACATT CCAAAACTAT
TTCAGAATGT ACACTAAATT AGCAGGTATG ACAGGTACTG CACTTACTGA GGAAACTGAG
TTTAGAGAAA TATATGGACT AGACGTTGTT GTTATTCCAA CTCATAGACC AGTTCAAAGG
GAAGACCATT CAGATTTAGT ATTTAAAACT GCTAAAGGAA AATATGATGC CATAGTGGAA
GAAATAATAG AAACTCATAA GACAGGTCAA CCAGTCTTAG TTGGTACAAC TAGTATAGAA
AAATCAGAAT ATCTTTCATC TTTATTAAAG AAAAAAGGTG TTCCGCATAA GGTTTTAAAT
GCTAGATACC ATGAGCAAGA AGCTGAAATT GTATCTCATG CAGGTGAGTT AGGTAACATA
ACAATTGCAA CTAACATGGC TGGTAGAGGT ACTGATATTA AACTTGGAGA AGGTGTTTTA
GAAGTTGGTG GTTTAAAAAT CATAGGTACT GAAAGACACG AATCAAGAAG AATAGATAAC
CAGCTTAGAG GACGTTCTGG TCGTCAAGGA GATAAAGGTC ATTCAAGATT CTATATCTCT
TTAGAGGATG ATTTAATGAG AATATTTGGC TCAGAAAAAC TTCAATCTGT TGTTGATAGA
TTAGGATTAG AAGAAACTGA GGCTATTGAA AGTAAAATGG TTACTAAATC AATAGAAAAT
GCTCAAAAGA AAGTAGAAGG TAACAACTTT GATATAAGAA AAACATTATT AGGATACGAT
GATGTTATGA ATAAACAAAG AGAAGTTATC TATAAGCAAA GATCACAAGT TTTAGAGGGT
GAAAACTTAG AAGACAGCGT TCAAGCTATG ATTGAAGATG TTGTAACTAG TGCTGTTCAA
GCTCACTTAG GAAATATTGA TGAAGATGAT TTTGAAAAAG AACTTGGAGA TTTAATAAAA
TACTTAGAAG ATATAATGTT ACCACATGGT AAATTCACTG TAGAAGAATT AAAAACTTCT
TCAAATGAAG AAATTACTAG AAAATTCATT GAATGTGCTA GGGAAATCTA CAAGGAAAAA
GAAGAGTTCG TTGGCTCAGA GCAAATGAGA GAAATTGAAA GAGTTATAAT CTTAAGAGTT
GTTGACACTA AGTGGATGGA TCACATAGAT GATATGGATC ACTTAAAACA AGGTATTGGA
TTAAGAGCTT ACAAACAACA AGATCCAACT CAAGCTTACC AAATGGAAGG TAGTGCTATG
TTTGATGAAA TGATAAATAA CATCAAAATA GACACAGTAA GATACTTATT CCATGTAAAA
GTTGAAGCTG AAAAACCACA AAGAGAGAGA GTTGCTAAGG AAACAGGAGC AAGTCATGGT
GGAGACTCTC AAGAAGTAAA GAAAAAACCA GTTAAAAAAG AGCCTAAAGT AGGTAGAAAT
GATTTATGTC CATGTGGAAG TGGAAAAAAA TATAAATCAT GTTGTGGAAG AGAAGTAGTT
TAA
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| Protein sequence | MGLFDKIFGS YSDREVKRIT PIVDKIDSLG PEMEKLSDEE LKQKTFEFKD RYAKGESLDD
MLPEAFAVCR EASTRVLGMK HYREQLIGGT VLHQGRIAEM KTGEGKTLVA TLPVYLNAIA
GKGVHVITVN DYLATRDKEW MGQLYEFLGL TTGVIVHGLT NDQRREAYNA DITYGTNNEF
GFDYLRDNMV IYKEERVQRP LHYCIVDEVD SILIDEARTP LIISGAGSKS TDLYKIADFF
VKKLREEEDY TIDEKAHAAM LTDKGVAEAE KAFGIENYAD ANNMELQHHI TQALKANYVM
KRDKDYMVKD DEIAIVDEFT GRLMEGRRYS DGLHQAIEAK EGVKVQRESK TLATITFQNY
FRMYTKLAGM TGTALTEETE FREIYGLDVV VIPTHRPVQR EDHSDLVFKT AKGKYDAIVE
EIIETHKTGQ PVLVGTTSIE KSEYLSSLLK KKGVPHKVLN ARYHEQEAEI VSHAGELGNI
TIATNMAGRG TDIKLGEGVL EVGGLKIIGT ERHESRRIDN QLRGRSGRQG DKGHSRFYIS
LEDDLMRIFG SEKLQSVVDR LGLEETEAIE SKMVTKSIEN AQKKVEGNNF DIRKTLLGYD
DVMNKQREVI YKQRSQVLEG ENLEDSVQAM IEDVVTSAVQ AHLGNIDEDD FEKELGDLIK
YLEDIMLPHG KFTVEELKTS SNEEITRKFI ECAREIYKEK EEFVGSEQMR EIERVIILRV
VDTKWMDHID DMDHLKQGIG LRAYKQQDPT QAYQMEGSAM FDEMINNIKI DTVRYLFHVK
VEAEKPQRER VAKETGASHG GDSQEVKKKP VKKEPKVGRN DLCPCGSGKK YKSCCGREVV
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