| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2427 |
|---|
| Symbol | |
|---|
| ID | 4202801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 2700627 |
|---|
| End bp | 2701970 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083292 |
|---|
| Product | peptidase family protein |
|---|
| Protein accession | YP_696848 |
|---|
| Protein GI | 110800896 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TATATATAGC CACAATAAAT ATACTTCTTT GTACATTTAT TTTGCTTATA
CAACTCTCTC TAGTTTATAA AAATAGGCTT GATCCCTTTG AAAGAGAAGG TGTTTTAAAG
AATATAGAAT ACTTAACCTC TGATGAATTA GAAGGAAGAC TTTGCGGAAA TGAAGGTAAT
TACTTAGCTC AAGAATTCAT TGAAAATTCT TTTATTAAAT CAAACATAAA AAAACTTAAT
TCTAGTTATC TTCAAGATTT CAATGTAAAA GCCCCTATTT TAGTTGAAGG AGAGCCTTAT
TTAAAAGTTT ACGATAAAAA TAATAAGTTA GTATCTTCAT ATAAATATGG AGTAGATTTT
AAAGAAGCCT TTATAAACTT TAGGGTAAAT CATATAACTT TTGATAATAC AAATGAATTT
AAAGTTCTTC CTACAATAAT GAAAGGAACT TCTTCATCTA ATAACAGTGT TGTATTTCTC
TCATCTCCAG TAGATTCTTT TAATTTTAGA AGCTCTTTTA TTGAGGATAC ACCTTGTGAC
TTATATGTGG TAGTAGCTCC AAATCTTATA AAAGAACTAG AGACATATTT AAATAAAGGT
TACAAAATAG ACTGTTTTAT CCCTTATGAG GTTAAAGAGA AAGTTGTTAA CAATGTTACT
GGAATTATAA AAGGTAAAAA TCCATTTTTA CCCCCTTTAG TCTTAACAGC TCATTTTGAT
CATATGGGAA AAGGACTTTC TGGTGAAATT TATAGAGGTG CTTTAGATAA TGCTTCTGGT
GCTTCATTTT TATTAGAATT AAGTTCTTTC CTAGCTTCTC TTCCTCAACC ATCAAGGGAT
ATAATAATAG TCTCTCTAAA TGCTGAAGAA TTCGGATTAC TAGGTTCTAA AAATTTTGCT
AAAGAAAATA AAGACTTATT AAAAAACGCT ACAGTTATTA ACTTTGATAT GATTGGAAGT
GATAAAGATA TCCCACTCAC ATTTATGGCA GGAGAAGATA CTTGTTTCCA CAGTGATTTA
CTAGATAGGC TTTGTGAAAT TTGTAATGAA AAGAACATAA CTAATATTAT AGAAAATAAA
GATTCCTCTG ACCACGCAAG CTTTATTAAA GAAGGTTTTG ATGCAATAAC AATAAATGAT
GGTGATGTAA CAAGAATTCA CACTCCAGAA GATAAAATTG AATATATAAG TCCTACAGCC
ATAGATAGAA GCTTCTCTGT GGTATGGAGC GAAATATTTG ACTCAGCTTA CTCATCCTCT
GGATTATTCT TATTAGACTC AAAAGTTCTT ATATTGCTAA TATTATCAGC TTTAATTTGT
TTAATATTAA AGTTAAAAAG TTAA
|
|---|
| Protein sequence | MKKLYIATIN ILLCTFILLI QLSLVYKNRL DPFEREGVLK NIEYLTSDEL EGRLCGNEGN
YLAQEFIENS FIKSNIKKLN SSYLQDFNVK APILVEGEPY LKVYDKNNKL VSSYKYGVDF
KEAFINFRVN HITFDNTNEF KVLPTIMKGT SSSNNSVVFL SSPVDSFNFR SSFIEDTPCD
LYVVVAPNLI KELETYLNKG YKIDCFIPYE VKEKVVNNVT GIIKGKNPFL PPLVLTAHFD
HMGKGLSGEI YRGALDNASG ASFLLELSSF LASLPQPSRD IIIVSLNAEE FGLLGSKNFA
KENKDLLKNA TVINFDMIGS DKDIPLTFMA GEDTCFHSDL LDRLCEICNE KNITNIIENK
DSSDHASFIK EGFDAITIND GDVTRIHTPE DKIEYISPTA IDRSFSVVWS EIFDSAYSSS
GLFLLDSKVL ILLILSALIC LILKLKS
|
|---|
| |