| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2426 |
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| Symbol | |
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| ID | 4202441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2698353 |
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| End bp | 2700515 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083291 |
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| Product | RNA-binding protein |
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| Protein accession | YP_696847 |
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| Protein GI | 110800077 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATA TAAATCATAT TTTATCAAAG GAACTTGGTA TTTCATTAAA ACAGGTAACA
AGCGTTATAG AAATGTTAGA TGAAGGAAAT ACAGTACCTT TCATAGCTAG ATATAGAAAA
GAAAGAACTG GTGGATTAAC AGATGAGGTT CTAAGAAAAT TTAATGAGAG ATTAACATAT
TTAAGAAATT TAGAAAGTAG AAAAGAAGAT GTTTTAAGAA TAATAGAGGA GCAAGAAAAA
TTAACTCCAG AATTAAAACT AAAAATTGAG AAAGCTACTA CCCTTACTGA GGTTGAAGAT
ATATATAGAC CTTTTAAAGC TAAAAAGAGA ACAAGAGCTA CTATGGCTGT TGAAAAAGGA
TTAAAGCCAT TAGCAGAGCT TATTCTATCA GGAGAGTTTA ATGGTGATAT AGTAGAAGAG
GCTAATAAAT ATATTAATGA AGAAAAAGGT GTTAAAAATG AAGAGGAAGC TCTTCAAGGG
GCTATGGATA TTATAAGTGA AATAATATCT GATAATGCTG ATTATAGAAA ATGGATTAGA
AATTTTGTTC AAAAGGATGG AATAATTCAG GTAAAGGGAA GCAGTGAAGA ACAAACACCT
TATGAAATGT ATTATGATTA TAAGGAGCCT GTTAGAACAA TTCCATCTCA TAGAATATTA
GCTATAAATA GAGGAGAAAA AGAAAAAATT CTTTCAGTTA AAGTAACTTG TAATGATGAT
ATAATTATAG ATTATTTAAA TAAAAAAGTT TTAAAGGGAA ATAAAATTAC TGATAAGTAT
TTAGAAGAAA GTATAAAGGA CTCCTTTAAA AGACTTATAT ATCCTTCAAT AGAAAGGGAA
ATAAGAAGTG AATTAACCTC TAAGGGAGAA GAGGGAGCAA TTGATATATT TAAGGCTAAT
TTAAAAGCTC TCTTAATGCA AGCTCCTATT AAGGGAAAAG TTGTAATGGG ATTTGACCCT
GGATTTAGAA CTGGATGTAA GGTAGCAATC TTAGATGAAA CAGGAAAATT TGTTGAGAAT
ACAACAGTTT ATCCAACAGC CCCTCAAAAT AGAATTGATG AAACAATAAG TACACTTAAA
AAACTTATTA AAAAACATGG AGTTCAAGTT ATTTCTTTAG GAAATGGAAC AGCTTCAAGA
GAATCAGAAG AAGTAATTGC AAAGATGCTT AAGGAAATAA AAGAGGAAAC AGGAAAAGAA
TTATTTTATG TTATAGTTTC TGAGGCAGGT GCTTCTGTTT ATTCAGCATC AGAACTTGCA
AATAAGGAAT ATCCAGACTT AGATGTAACT GTAAGAGGAG CAATTTCTAT AGGAAGAAGA
CTTCAAGATC CATTAGCTGA GCTTGTTAAA ATAGATCCTA AGGCTATAGG AGTAGGACAA
TATCAACATG ATGTAACTCA GAAAAAACTT GATGAATCCT TAGCAGGGAT AGTTGAGGAT
TGTGTTAATA ATGTAGGAGT AGATTTAAAT ATAGCAACTC CATCATTATT AAGTTATATT
TCAGGGATAA ATGCTTCAAT AGCTAAAAAT ATTGTTGATT ATAGAGAAGA AAATGGTAAG
TTTAAAAGTA GAAAAGAGCT TTTAAAAGTT AAAAGATTAG GACAAAAAGC TTATGAACAA
TGTGCAGGAT TCTTAAGAGT TATGGAAAGC AAAGAAGCTT TAGATAATAC TTCAGTTCAT
CCAGAGTCAT ATAAAGTAGC TAAGGAACTT ATAAAAACTT TAGGATATAC AGAAGAAGAT
TTAAAAAATG GCAAATTAGT AGATATAGAT GAGAGAGTAA AAGCAAAAGG AATTTCTAAC
TTAGCAAAAG AATTAGAAGT TGGAGAACCA ACACTTAATG ATATTATAAA GGAAATTAAA
AAGCCTGGAA GAGATCCAAG AGAGGAATTA CCTAAACCAA TATTTAAGTC TGGCGTAATA
GAAATGAAAG ATTTAAAACC AGGTATGATT TTAATGGGGA CAGTTAGAAA TGTATCTGAT
TTTGGTGCTT TTGTAGATAT TGGAGTTCAC CAAGATGGAT TAGTTCATAA GAGCCAAATG
GCAGATAGCT TTGTTAAACA TCCACTTGAT ATAGTTAAGG TTGGAGATGT TGTAGAAGTT
AGAATATTAG ATGTTGATTT AAAAAGAAAG AGAATTTCAT TATCAATGAA AAAAGAAGGT
TAA
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| Protein sequence | MDNINHILSK ELGISLKQVT SVIEMLDEGN TVPFIARYRK ERTGGLTDEV LRKFNERLTY
LRNLESRKED VLRIIEEQEK LTPELKLKIE KATTLTEVED IYRPFKAKKR TRATMAVEKG
LKPLAELILS GEFNGDIVEE ANKYINEEKG VKNEEEALQG AMDIISEIIS DNADYRKWIR
NFVQKDGIIQ VKGSSEEQTP YEMYYDYKEP VRTIPSHRIL AINRGEKEKI LSVKVTCNDD
IIIDYLNKKV LKGNKITDKY LEESIKDSFK RLIYPSIERE IRSELTSKGE EGAIDIFKAN
LKALLMQAPI KGKVVMGFDP GFRTGCKVAI LDETGKFVEN TTVYPTAPQN RIDETISTLK
KLIKKHGVQV ISLGNGTASR ESEEVIAKML KEIKEETGKE LFYVIVSEAG ASVYSASELA
NKEYPDLDVT VRGAISIGRR LQDPLAELVK IDPKAIGVGQ YQHDVTQKKL DESLAGIVED
CVNNVGVDLN IATPSLLSYI SGINASIAKN IVDYREENGK FKSRKELLKV KRLGQKAYEQ
CAGFLRVMES KEALDNTSVH PESYKVAKEL IKTLGYTEED LKNGKLVDID ERVKAKGISN
LAKELEVGEP TLNDIIKEIK KPGRDPREEL PKPIFKSGVI EMKDLKPGMI LMGTVRNVSD
FGAFVDIGVH QDGLVHKSQM ADSFVKHPLD IVKVGDVVEV RILDVDLKRK RISLSMKKEG
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