Gene CPF_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2425 
Symbol 
ID4202672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2697410 
End bp2698006 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content31% 
IMG OID638083290 
Producthypothetical protein 
Protein accessionYP_696846 
Protein GI110799575 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AAACCTTAAA CACAAACAGA TTCATTAAAT TATCACTTTT ATCTGCGATT 
GCAGTAATAC TTATGTATAT TGACTTTCCA GTAATACCTA TATTCCCATG GCTTAAGATT
GATTTAAGCG ATGTGCCTGC ACTTATGGGA GCCTTTGCTT TTGGTCCATT AGCAGGGGTA
ATAATAGAAC TTATGAAAAA TTTATTAATA TTAATAGTAA AGGGAACTGG AACAGGATTT
GTAGGTGAGC TTGCTAACTT TTTAGTTGGA GTGGCTTTAG TATGGCCAGC AGCTTTAGTT
TATAAGAAAA ATAAAACTAA GAAAACTGCT ATTTTAGGAA TGGTACTAGG AGTTTTATGT
ATAGAAGTGG TAGGAATATT AGCTAATGTT TATTTATTAC TTCCAGCATA CGGTATGGCT
ATGTCAAAAG CAGAGTTAAT GCAATATGTA ACAGTTGGAT TAATTCCATT TAACGGAATA
AAATCTATAT TGGTTTGTGG AATAACATAT GCTTTATATA AAAAGGTTTC TGTATCAATA
TTTAAGGTTG AACCTATGCT AGATAAACCA AAACAAATGA AAGAAAATTT AGGATAA
 
Protein sequence
MKTKTLNTNR FIKLSLLSAI AVILMYIDFP VIPIFPWLKI DLSDVPALMG AFAFGPLAGV 
IIELMKNLLI LIVKGTGTGF VGELANFLVG VALVWPAALV YKKNKTKKTA ILGMVLGVLC
IEVVGILANV YLLLPAYGMA MSKAELMQYV TVGLIPFNGI KSILVCGITY ALYKKVSVSI
FKVEPMLDKP KQMKENLG