Gene CPF_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2423 
Symbol 
ID4201909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2696166 
End bp2696870 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content31% 
IMG OID638083288 
Productglycoprotease family protein 
Protein accessionYP_696844 
Protein GI110801308 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAT TAGCTATTGA TTCATCTTCT AGCACTGCTA CTTGTGCACT TGTTAGTGAA 
AAAGGAGTTC TAGGAGAAAT AAACTTAAAT GATAAAAAAC AACATTCCGT TTTATTAATG
GACTTAATAG ATGATTTACT TAAGTATAAT AATCTAAAAA TTAAAGATTT AGATGGATTT
GCTATTAGTG AAGGTCCTGG TTCATTTACT GGACTTAGAA TTGGTATGGC AACTGTTAAA
GGATTAAGTT TTGGAAGTAA AAAACCTTCT GTTTGCGTTT CTTCCCTTGA TGCTTTAGCT
TATAATATTT CAGGATTTAA TGGAATAATC TGTCCTATTA TAGATGCTCT TAGAGGAAAT
GTCTATGCTT CTCTATATAA AAAAGAAGGA GATGAGCTAG TATCTCTTAG TGAAAAAGAA
TGCATTTCTT TAACTGATTT AATTGAAAAA ATAAAAGAAA AAAATGAGGA TGTTATCTTT
GTGGGAGATG GAATAAGCAA ACACAAGGAA GCTTTAAAAG AAGCTCTTCC TAATGGCTCT
TTTGCACCTA GTCATTCATC TTATCCAAGA GCAGCATCAG TTGGAGAATT AGGCTTAAGA
TTATTAGAGT CAGGAGTTTC TCATGATTTA AATACATATG CTCCTATATA CTTAAGAAAA
TCTCAAGCTG AAAGAGAATA TGAAGAAAGA ATGAGATTAA AATAA
 
Protein sequence
MLVLAIDSSS STATCALVSE KGVLGEINLN DKKQHSVLLM DLIDDLLKYN NLKIKDLDGF 
AISEGPGSFT GLRIGMATVK GLSFGSKKPS VCVSSLDALA YNISGFNGII CPIIDALRGN
VYASLYKKEG DELVSLSEKE CISLTDLIEK IKEKNEDVIF VGDGISKHKE ALKEALPNGS
FAPSHSSYPR AASVGELGLR LLESGVSHDL NTYAPIYLRK SQAEREYEER MRLK