Gene CPF_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2418 
Symbol 
ID4202487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2692014 
End bp2694188 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content28% 
IMG OID638083283 
ProductSer/Thr protein phosphatase family protein 
Protein accessionYP_696841 
Protein GI110798828 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAAC TAATTAAACC ATTAAGTGTA GCTACAATGA TGTTCTTATC ATTAAATTTA 
TGTTTTTTTA ATGGTAAGCT TGTTAAGGGG GAAGAGATTT CTAATGAAAC TAAGGTTACC
ATCTTAGGAA CCTCAGATAT ACATGGAAGA TTTGTTCCTT GGGAATATTC ATCAGATACT
GAAAATAAAT CAGGAAGTTT ATCACAAATT TCAACAATTG TTAAAAAGGA GAGAAATGAA
AATCCAAATT TAATTCTTGT AGATGCAGGT GATTCAATTC AAGATAACTT TGTTGAAACT
TTTAATAAAG GACCTCAACA ACCTATGGTT TTAGGTATGA ATAAGATGAA ATATGATGTT
TGGGAAATGG GAAACCATGA ATTTAATTTT GGATTAGATG TGCTTAAACA TGTAACAAGT
CAATTTGAAG GAAAGGTCTT AGCTGGTAAT ATCTATAATG ATGATGGAAC AAGATTTATG
GATGGATATA CCATTATAGA AAGAGATGGT ATAAAGATAG GTATTATAGG TATGGATACT
CCAATGATAA AAGAGTTTGA AAAACCATAT AATATAAAAG GAATTGAATT TAGAGATCCA
GTTAAAGAAA CAAAAAAGAT TATAAAAGAA CTAGATGGAA AAGTGGATGC CATGATTGGA
GTTATGCATA TGGGATTAGA TAATGAAAAT GCTATTTCTA ATACAGGTGT TACAGATATT
GCTAATCAAT GTCCAGAGCT TACAGCAATT GTAGGAGGAC ATATGCATAA GTTAGTTAAA
AATGAGGTTG TAAATGGAGT TATTATAACT GAGCCAGGAA AGTATGGACA AGCTGTATCA
AAAATAGATT TAACATTTAA AAAAGAAAAT GGAAAAAATG TACTTAAAAA TAAAAATGCA
GATACTATCT CAGTAGCTAA TGTAGAATCA GATAAAGAAA TAGAAGATCT ATTAAAACCT
TTCCATGAGG AATTGCGTAA GGATGCTAAC TCAGTTATTG GAAGACTTGA AGGGGTTAAC
ATGGTAGATG AAGATTACAT AAAAGGAATA CCTACTATAC ATATAGAAGA TACTCCATTA
ATTGATTTCT TTCATGAAGT AGGAAAGTAT TATAGTAAAG CAGATGTAAT AGCTTTATCT
ATAGATAATG ATAAGGCTAA GTTAAATGTA GGAGATATAA AGAAGAAAGA TATAGCTTAT
AACTATAGAT ATACTGGTGG AGAAATAAGC GTTTATGAAG TAACTGGAAA AGACTTAAAA
AAATATATGG AATGGGCAGC TGGCTATTTT AATACATTAA ATCCAGGAGA TATTACTCCA
AGTTTTAATC CTAAAAGAAG AGCGTCAAAG TATAGTACTA ATGATATGTT TGGAGGAATA
ACTTACAAAA TTGATTTACG AGAAAAAGAA GGTAATAGGA TTAAAGATGT TAAGTATAAA
GATGGAAGAG AACTTAAGGA TACAGATGTT TTAAAACTAG GAATGAATTC ATATAGACTT
GGACAATTAC AAGGAAAAGG AGGAATCTTT GAAGGAAAAG AATTTAAAAA ACTTTGGGAT
TCTAAGACAG CTTATGGAGA AGAAGAAGGA ACAATAAGAA ATTTAGCTAT AGATTATATT
AAAAATGTTA AAAATGGCCT TATAAATGCA AAAAAACAAA ATAATTGGTG TCTATTAGGA
ATAGATCCAA ATTCAGAAAA CTATAAAAAG GTTAGAGATT TAGTTAATTC AGGAGAATTA
AAAATACCTA CATCAGAAGA CGGAAAATAT ACTAATATAG CATCAATAAA TGAAAAAGAT
TTACCTTTAG ATAATAATAC ATCTAAAGAA AATGAGGAAA ATATAAACTT AGATTCTATT
AATAATAAAA ATAATAAGGA TCAAGTAGTT AATGAAGAAA GTAAAAAAGA CGTGCCTAAA
GTAGAGGAAA ACATAGAAAA ACAAAAAAAT AATAAAGAAA ATAATTCAAA TGAAGATAAT
ACTTTAGTTA AAGAAGATAG TAAATCTAAA GAAGAGAATG AAAAAAATAA TGAACAAAAT
AATATTGAGG AAGTTTCTAA AAAAGAAAAT AAACTTCCTA ACACAGGATC TCCTATAGGT
GCAGAAGCTA TGTCACAAAT AGGTATTTTA GTATTAGGTG CAGGTGTAAT ATTAAAAAAG
AAAAATAAAA AATAG
 
Protein sequence
MRKLIKPLSV ATMMFLSLNL CFFNGKLVKG EEISNETKVT ILGTSDIHGR FVPWEYSSDT 
ENKSGSLSQI STIVKKERNE NPNLILVDAG DSIQDNFVET FNKGPQQPMV LGMNKMKYDV
WEMGNHEFNF GLDVLKHVTS QFEGKVLAGN IYNDDGTRFM DGYTIIERDG IKIGIIGMDT
PMIKEFEKPY NIKGIEFRDP VKETKKIIKE LDGKVDAMIG VMHMGLDNEN AISNTGVTDI
ANQCPELTAI VGGHMHKLVK NEVVNGVIIT EPGKYGQAVS KIDLTFKKEN GKNVLKNKNA
DTISVANVES DKEIEDLLKP FHEELRKDAN SVIGRLEGVN MVDEDYIKGI PTIHIEDTPL
IDFFHEVGKY YSKADVIALS IDNDKAKLNV GDIKKKDIAY NYRYTGGEIS VYEVTGKDLK
KYMEWAAGYF NTLNPGDITP SFNPKRRASK YSTNDMFGGI TYKIDLREKE GNRIKDVKYK
DGRELKDTDV LKLGMNSYRL GQLQGKGGIF EGKEFKKLWD SKTAYGEEEG TIRNLAIDYI
KNVKNGLINA KKQNNWCLLG IDPNSENYKK VRDLVNSGEL KIPTSEDGKY TNIASINEKD
LPLDNNTSKE NEENINLDSI NNKNNKDQVV NEESKKDVPK VEENIEKQKN NKENNSNEDN
TLVKEDSKSK EENEKNNEQN NIEEVSKKEN KLPNTGSPIG AEAMSQIGIL VLGAGVILKK
KNKK