Gene CPF_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2416 
Symbol 
ID4202894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2690273 
End bp2691412 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content27% 
IMG OID638083281 
ProductSer/Thr protein phosphatase family protein 
Protein accessionYP_696839 
Protein GI110800542 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.690282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGG TAAAAATATT GCATTGTAGT GATATTCATT TTGATACTCC TTTTAAAGAG 
TTACCAAAGG AAATTGGTAC AATGAGGAGA GCTGAGTTAA GAGAAAGCTT TAGTAAAATA
ATAAATAGAG GAATTGATGA AAAAGTTGAT TTAGTTCTTT TAGCGGGAGA CCTTTTTGAC
AATGATACTA TAGAAAAGAG TACTCTTACT TTTATAAAGG ATCAAATTGA TAAACTTAAA
AAACATAATA TAAGAGTATT TATTTCAGCA GGAAATCATG ACCCATATAA TAAAAAATCT
TTTTATAATA TGGTTAACTT AGGCGAAAAT GTTCATATAT TTAAGGATGA AATTGAAAGA
ATAGAAATAC CTGAATTAAA TACTGTTGTT TATGGAGCAT CCTTTAAGGA AAAATATATA
AAAGAGTCAA ATCTTAAGGA TTTTACTCCA AAAGAAGAGG ATAAGGATTT AGTAAAAATA
ATGGTTCTAC ATGGTGATTT AGGGAATAAT GAAACAGGAG AGTATAATCC CTTATTATTT
AAGGAAATAG AAGAGAGTAA GATGGATTAT ATTGCTTTAG GACATATTCA TAAATTTTCA
GGAATAAAAA GAATCGGTAA TACCTATTAT GCATATTCAG GATGTCCAGA GGGAAGAGGA
TTTGATGAAG AAGGAGATAA AGGAATAATA TTAGGAGAGG TATCCCTTGG AGTTGTAGAC
CTAGATTTTA TAAAGACTAA TAAAAGAGAG TATTTTCTTA AGGAAATTGA TATATCAAAT
TGTAAAACTA AAGAAGAGGT TATAGATAAG ATACTTAATA CTATTTCAAA AGAATCAAGA
GAAAAAAATC TATTTAAAAT CATCTTAAAA GGGAATATAG AAGAGTCTTT TAAAATAGAT
AGTGATTTAA TAGAAAACTT AATTAGAGAT AAATTCTTTT ACTGTAAGAT TGTAAATTCT
ACTAGAATAA AAATAGATAT TGATGAAATG AGCAATGAGT ATTCAATTAA GGGGATTTTT
TGTTCTTTAA TAAAGGATGC TTTAGAATCT AATGAAGAGG ATGAAGAGAT ACTAGATATA
GCTTTTAGAA TTGGTATGGA GAGTATTTTA GATGGAGAAG TGAATTTAAA TGATAATTAA
 
Protein sequence
MKKVKILHCS DIHFDTPFKE LPKEIGTMRR AELRESFSKI INRGIDEKVD LVLLAGDLFD 
NDTIEKSTLT FIKDQIDKLK KHNIRVFISA GNHDPYNKKS FYNMVNLGEN VHIFKDEIER
IEIPELNTVV YGASFKEKYI KESNLKDFTP KEEDKDLVKI MVLHGDLGNN ETGEYNPLLF
KEIEESKMDY IALGHIHKFS GIKRIGNTYY AYSGCPEGRG FDEEGDKGII LGEVSLGVVD
LDFIKTNKRE YFLKEIDISN CKTKEEVIDK ILNTISKESR EKNLFKIILK GNIEESFKID
SDLIENLIRD KFFYCKIVNS TRIKIDIDEM SNEYSIKGIF CSLIKDALES NEEDEEILDI
AFRIGMESIL DGEVNLNDN