Gene CPF_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2412 
SymbolptsG 
ID4203550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2684693 
End bp2686222 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content34% 
IMG OID638083277 
ProductPTS system, glucose-specific IIBC component 
Protein accessionYP_696835 
Protein GI110800153 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR02002] PTS system, glucose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG CTTTTGGAGT TTTACAAAGA ATAGGTAAAG CTTTGATGTT ACCAGTTGCT 
TTATTACCAG CGGCAGGTTT ATTACTTGGA TTTGGATCAA TGTTTCAAGA TCCTCAGTTT
TTAAGCTTAG TGCCAGCATT AAATGCAGGG TGGTTTCAAT TAATAGCTAC AATAATGTCT
GATGCAGGTA ATATAATATT TTCAAACTTA GCATTGTTAT TCGCAGTTGG GGTAGCTGTA
GGATTATCAG AAGGAGACGG TGTTGCAGGT CTTGCAGCAA TAGTTGGTTT TTTAATACTT
AATGTAACAA TGGGAATTGG TGGAGGAATA ACTGCCGACA TTGTTGCTGG TACTAAAAAT
GGTATGTATG CCACAGTTCT TGGAATACCA ACACTTCAAA CTGGAGTATT TGGTGGAATT
ATTATGGGAG TTATAGCCGC AGCTTTATAT AAAAGGTTCT ATAAGATAGA ATTACCTTCA
TACTTAGGAT TCTTTGCAGG TAAAAGATTT GTTCCAATAG TGACTGCTGT TTCAGCTTTA
GTGCTTGGAG GAATAATGGT ATTTGTATGG CCTCCAATAC AAGGTGCCTT ATTGTACTTC
TCACAAAATA TGATAAGTGC TAATCAAACC CTATCAGCTT TATTATTTGG AATAATAGAA
AGAGCATTAA TTCCATTTGG ATTACATCAT ATTTGGTATA ATCCATTCTG GTTCCAATTT
GGAGAATACA CAAATAAAGC AGGTCAATTA ATAATGGGAG ATAATCAAAT ATTCTTTGCC
CAATTAAGAG ATGGAGTTCC ATTTACAGCA GGTACCTTTA TGACTGGTAA GTTCCCATTT
ATGATGTTTG GATTGCCAGC AGCAGCCTTA GCAATGTATC ATGAAGCTAA ACCAGGTAAA
AAGAAAATAG CTTCAGGTAT TTTATTCTCA GCTGCCTTAA CTTCCTTCTT AACAGGAATT
ACTGAGCCTT TAGAGTTTGC ATTCTTATTT GTTGCGCCAG TATTATTTGC AATCCACTGT
GTATTAGCAG GCTTATCCTT TATGATAATG CAATTATTAA ATGTTAAAAT AGGTATGACT
TTCTCAGGTG GACTTTTAGA CTTTATACTA TTAGGAGTAA TTCCAAATAG AACTAGATGG
TGGTTAGTAA TACTTGTAGG ATTAGGCTTT GCTGTAATTT ACTATTTCTT ATTTAGATTC
TTTATTAGAA AGTTTGATCT TAAGACTCCA GGTAGAGAAG ATGATGATAT ATTTGATGAT
ATGGATAACC AAACTGTAAA TGATGACTTA GCTGCTGAAA TTTTAATAGC TTTAGGCGGT
GCAGGCAATA TAAATAAATT AGATGCTTGC ATAACTAGAT TAAGAGTTAC AGTTAATGAT
TCAAGCAAAG TTAATAAAGA AAGATTAAAA GAGCTTGGAG CAGCTGGTGT AATGCAAGTT
GGAGAAAATA TTCAAGCTAT ATTTGGAGGA AAATCAGATA TACTTAAAAC TCAAATTAGA
GAAATTATGA ATGGCATGGG AGAAAAGTAG
 
Protein sequence
MKKAFGVLQR IGKALMLPVA LLPAAGLLLG FGSMFQDPQF LSLVPALNAG WFQLIATIMS 
DAGNIIFSNL ALLFAVGVAV GLSEGDGVAG LAAIVGFLIL NVTMGIGGGI TADIVAGTKN
GMYATVLGIP TLQTGVFGGI IMGVIAAALY KRFYKIELPS YLGFFAGKRF VPIVTAVSAL
VLGGIMVFVW PPIQGALLYF SQNMISANQT LSALLFGIIE RALIPFGLHH IWYNPFWFQF
GEYTNKAGQL IMGDNQIFFA QLRDGVPFTA GTFMTGKFPF MMFGLPAAAL AMYHEAKPGK
KKIASGILFS AALTSFLTGI TEPLEFAFLF VAPVLFAIHC VLAGLSFMIM QLLNVKIGMT
FSGGLLDFIL LGVIPNRTRW WLVILVGLGF AVIYYFLFRF FIRKFDLKTP GREDDDIFDD
MDNQTVNDDL AAEILIALGG AGNINKLDAC ITRLRVTVND SSKVNKERLK ELGAAGVMQV
GENIQAIFGG KSDILKTQIR EIMNGMGEK