| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2405 |
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| Symbol | rpsA |
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| ID | 4203377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2676482 |
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| End bp | 2677618 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083270 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_696828 |
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| Protein GI | 110799693 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA ATCTTACAAT GTCAGAATTA ATGGATAGCT TTGAGTTAAA GCATTTTCAT
AAAGGTGAAA TAGTTAAAGG GAAAGTTATA AGCGTAAAGA ATGATGAAAT AATAGTTAAC
ATTGGTCATT TTGCAGATGG TGTGGTACCA AGAAATGAAA TTTCAAATGA TAAGAATTTT
GATATAAATT CAATAAATGT AGATGATGAT ATATTTGTAA TGGTATTAAG TGGAGATGAT
GGAGAAGGAA ATGTTCTTCT ATCAAAGAAA AGAGCAGATG CAATAAAGGT TTGGGATGAT
TTAAAAGAAG CATTTGAAGA AGAAAAATCA ATAAAAGTTT CTTTAAAAGA AGTTGTTAAA
GGTGGAATAG TAGGAGATTT TAATGGTCTT AGAGTATTTA TGCCAGCTTC TCAATGTGCA
GGAAGAAGAA TAGAGAATTT AGAAGAATTA GTAGGAAAAA CTTTAGAAGT TAGAGTTATA
GAATTTAATA AAGAGAATAG AAAAGTTGTT GTTTCAAGAA GAGTAATAGA TGAAGAAATA
AGAAATAATG AAAAGAAAGC TCTTTGGTCT TCAATTAAAG AAGGAGAAAA AAGAAAAGGA
AAAGTAACTA GATTAGCTAA GTTTGGTGCT TTTGTTGATA TTGGTGGAGT AGAAGGATTA
GTTCACTTAA GTGATATGTC ATGGTCAAGA GTTCATAAGC CAGAAGAGGT TGTATCAGTT
GGAGATGAAG TAGAAGTATT TGTATCAGAA GTGGATATGG ATAGAGAGAG AATAGCACTT
TCATTAAAAG ATGTTATTAA AAATCCATGG GAAACATTAG AAGGATTAAA AGTTGGTGAT
GTTGTTTCAG GAAAAGTAAC TAATTTTATA AAGGTTGGAG CTTTTGTTGA AGTATTACCA
GGAATAGAAG GATTAGTTCA TATTTCAGAA ATTACTGATG AAAATATAGC TAAGCCATCA
GATATTTTAG AATTAGGTCA AGAAGTTAAG GTTAAAATCT TAAATATAGA TGATGAAAAC
AAGAAAATGA GCTTAAGTAT AAAAGATGCT GTAGAAACTT CAAATGAATA TATGCAGTAT
AATGATGAAG AGGAAGGTTA TTCATTAGCT GACTTGTTCA AAGGATTAAA TCTATAG
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| Protein sequence | MSENLTMSEL MDSFELKHFH KGEIVKGKVI SVKNDEIIVN IGHFADGVVP RNEISNDKNF
DINSINVDDD IFVMVLSGDD GEGNVLLSKK RADAIKVWDD LKEAFEEEKS IKVSLKEVVK
GGIVGDFNGL RVFMPASQCA GRRIENLEEL VGKTLEVRVI EFNKENRKVV VSRRVIDEEI
RNNEKKALWS SIKEGEKRKG KVTRLAKFGA FVDIGGVEGL VHLSDMSWSR VHKPEEVVSV
GDEVEVFVSE VDMDRERIAL SLKDVIKNPW ETLEGLKVGD VVSGKVTNFI KVGAFVEVLP
GIEGLVHISE ITDENIAKPS DILELGQEVK VKILNIDDEN KKMSLSIKDA VETSNEYMQY
NDEEEGYSLA DLFKGLNL
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