Gene CPF_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2397 
SymbolmreC 
ID4201571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2667598 
End bp2668449 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content30% 
IMG OID638083262 
Productrod shape-determining protein MreC 
Protein accessionYP_696820 
Protein GI110801264 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT TCAAGAATAA ACTGGCAGTA ACTGTTATAG TACTGTCAGT TGCCTTTTTA 
GGAATAATTA TATTTACTGT TAAGAGTGAT TCTAAAAATC CAATTTCAGG TGGAGTTGGT
ACTGTTTTAA ACCCTGTGCA GAAGGTTGTA TACACAATAA GTGATAAAGT TCATGATGTC
TTTGATTTCT TCTATAACTT TTCAGATGTT AAGAATGAAA ATAATGATTT AAAAAAGAAA
AATTTAGAAT TAGAAAATCA ATTAGTTGAA TACAATGAGT TAAAGCGTCA AAATGATGTT
TTAAGAGGAA TAGTTGATTT TTCTAAGGAA AATAATCAAT ATAAATATAT CGGTACAAAC
ATAATAGGAA AAAGCGGAAA TAGCTTTGTA GAAGGTTACA CTATTGATAA AGGATCAAGT
GAAGGGATTA AAAAAGATTA CATAGTGATT TCTCCAGAAG GATTAGTGGG AGTTGTAACA
GAAGTTCACT CAAACTGGTC AAAAATACAG ACTTTATTAA ATGAAAACGT AGCTGTTGCA
GCAACTATTG AAGGAGATAG CAATTCAGGA GACGGAATAG TTAAAGGATA TAGAAATGGT
AGTGAGATGC AAGCAGAGAT AACTAACTTA CCTATGAATT CTACAATAAA AGAAGGTGAG
ACAGTAGTTA CTTCAGGCCT TGGAGGATAT TATCCTAAAG GAATAAGAAT TGGTGAAGTA
ACATCAGTAC AATCAGATGA TGTTAAAGTT ATGAAAACCG CTATATTAAA AACATATGTT
GATTTTAATA ATTTACAAGA ATTATTTGTA GTTGTACCAC CATCAGAGAG AGATGGTATA
GTTAAGTATT AG
 
Protein sequence
MKFFKNKLAV TVIVLSVAFL GIIIFTVKSD SKNPISGGVG TVLNPVQKVV YTISDKVHDV 
FDFFYNFSDV KNENNDLKKK NLELENQLVE YNELKRQNDV LRGIVDFSKE NNQYKYIGTN
IIGKSGNSFV EGYTIDKGSS EGIKKDYIVI SPEGLVGVVT EVHSNWSKIQ TLLNENVAVA
ATIEGDSNSG DGIVKGYRNG SEMQAEITNL PMNSTIKEGE TVVTSGLGGY YPKGIRIGEV
TSVQSDDVKV MKTAILKTYV DFNNLQELFV VVPPSERDGI VKY