Gene CPF_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2373 
SymbolselA 
ID4201265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2643652 
End bp2645040 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content31% 
IMG OID638083238 
Productselenocysteine synthase 
Protein accessionYP_696796 
Protein GI110799995 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] 
TIGRFAM ID[TIGR00474] seryl-tRNA(sec) selenium transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG AACTTCTTAG AGCTTTGCCT AAGATAGATG AAATACTTGG TATTTTTAAT 
GAGGACTTTT TAAATGAAAA TGGGAGAGAA ACAGTTGTAA GTGCTTTAAG AGATATAATC
AATGAAAATA GGAAAGCTAT TCTAAATGAA GAGGTAGATT ATGCCTTAAC TAAGGAAGAA
GCTAAGAGTA AATGTGAGCA TAGATTACTT AAAAAAAGAG AAAGAAATTT AAAAAGGGTT
ATTAATGGAA CAGGTGTTGT TATTCATACT AATTTAGGAA GATCTTTGTT AAGCAAAGAG
GCCACTGAAG CAGTTGCTTT AGCCGCTTCA AGCTATAGCA ATCTAGAGTA TGATTTAGAA
AAGGGAGAAA GAGGATCTAG ATACTCCCTT ATAGAAGGTA TCATAAAAGA TATTACAGGA
GCTGAGGCAG CCTTAGTGGT AAATAATAAT GCAGCGGCCA TAATGCTTGT ATTAAATTCT
CTTTGTGAAA ATAAAGAGGT AATTGTTTCT AGAGGGGAAC TTGTAGAAAT AGGGGGCTCT
TTTAGAATTC CAGAAGTTAT GAATTTTTCA AGAGCTAAGC TTGTAGAAGT GGGAACAACT
AATAGAACAC ATTTATATGA TTATGAGGAT GCCATAACAG AAGAAACTGG AGCCTTTCTA
AAAGTTCATA GCTCAAACTT TAAAATAGTA GGTTTTACTA AGAGTGTAAG TGCTAATGAG
ATATGTAACT TAGCAAGGGA AAAGGATATA CCTGTAATAG AGGACATTGG AAGTGGTGTT
TTAATTGATT TAAGCAAATA TGGATTAGAA AAAGAGCCTA CAGTAATAGA AAGTTTAGAA
GATGGAGTAG ATGTTGTAAC ATTTTCTGGA GATAAGATGC TTGGTGGAGC GCAGGCTGGG
ATTATTGTAG GTAAAAAGAA ATTCATAGAT AAAATAAAAA GGAATCAATT AACTAGAGCT
CTAAGAGTTG ATAAATTTAC TTTAGCTGCT TTAGAAATTA CTTTAAAACA TTATTTAAAT
GAAAAAGAGG CAATTGAAAA AATACCAACT CTTCATATGA TGACTTTAGA TTTAAAGGAA
ATAAAAGAAA GAGCTAATAG ACTTTATAAG AATTTAGAAA GATTAAATAA GTTCTATAAG
TTTTCTATAG AAGAAGGTGA ATCAACAGTT GGTGGAGGTT CAATGCCAGA TAGTAAATTA
AGTACTTATT TACTTAGAAT AGATTCAGAT AGCATAAATG AAGTTAATTT AGAAAGAGAG
CTAAGAGAAT ATAAAATACC TATAATAACT AGAGTTTATA AAGGGGCAGT TTATATAGAT
CTTAGAACAA TCTTAGAAGA TGATTATGAA GTCATATTTA ATGCTTTAAA GGAAATAGGT
GAAAAATAG
 
Protein sequence
MTKELLRALP KIDEILGIFN EDFLNENGRE TVVSALRDII NENRKAILNE EVDYALTKEE 
AKSKCEHRLL KKRERNLKRV INGTGVVIHT NLGRSLLSKE ATEAVALAAS SYSNLEYDLE
KGERGSRYSL IEGIIKDITG AEAALVVNNN AAAIMLVLNS LCENKEVIVS RGELVEIGGS
FRIPEVMNFS RAKLVEVGTT NRTHLYDYED AITEETGAFL KVHSSNFKIV GFTKSVSANE
ICNLAREKDI PVIEDIGSGV LIDLSKYGLE KEPTVIESLE DGVDVVTFSG DKMLGGAQAG
IIVGKKKFID KIKRNQLTRA LRVDKFTLAA LEITLKHYLN EKEAIEKIPT LHMMTLDLKE
IKERANRLYK NLERLNKFYK FSIEEGESTV GGGSMPDSKL STYLLRIDSD SINEVNLERE
LREYKIPIIT RVYKGAVYID LRTILEDDYE VIFNALKEIG EK