| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2355 |
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| Symbol | virJ |
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| ID | 4203361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2620546 |
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| End bp | 2621994 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 638083220 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_696778 |
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| Protein GI | 110800506 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000138078 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA AACATAAATT TTCAGGAGGA TTTTTAATAA TATTTCTAAT TGCCTTTATA
ATTTTAAATT GTTTTTTAGG TAAAGCTTTT ATTAATTATC ATGAAAATAA AATTAAAAAT
GAAATGGATT CTTTATATAA AAGTAGCTAC AGTATTTTAA GGTTATATTT TCAAGTAAAC
AATTTGGAAG GAAACAAGGG GAATTTTAAT AGATATATTC CTAAAATATC AAATGATATT
AGTGAACAGG GAAAGTGTCA AATTGATGTT TTTAATGAAG ATTTAGAAAA GGAATATAGT
TATTATTTAG ATGATTTTTC CTTTGATTAC GAAAAGGATG GGGGCTATGA TGTTTTAAAA
GAAGCAAATA AGAATAAGGC TGCATTAAAC ATTTATAGAG ATGAAAATGC TGTTAAAGCA
TACTTAGCTT TTCCAGTTTA TGTTGATGAG AGTTTTTTAG GAAATATACT TTTAAGCAAG
GATTATTCAA AGGAATATTT AGAGTTAAGA GATTTAATGA GCAATATAAA ATTCATTGTT
TCAATAACAT TTTTACTTAT ATTAATTTTC ACATACTTTC TTTTTGAGAG AATAATAAAT
CCTTTAAATT ATATAAAAAA TTCTTTTAAA AGAATTGGTG ATGGTGACTT TAAAATAAAC
TTAAAAGTTA ATTCAAAGGA TGAAATAGGA GATTTAGCCT GTGGAGTAAA TAAAATGGCA
AATAAAATTG AGGAACAGAT TGAAAAAATA AATGAAGAAA AGGAAAAGGT TTTAACATTA
GAAAAAACTA GAACAGAGTT TTTTAATAAT ATTACTCATG AGTTAAAAAC TCCATTAACT
AATATTTCAG GATATGCTCA AATTATGAGT GAAGAAGATT TTCATGATAA TGATTTTAGA
AAATTTGCTT TAGAGAGAAT AAACAAGGAA AGCAAAAGAA TGCATGAACT TATAGTAAGT
TTGATTGAAA TTTCTAAAAA CAAAAGCGAC ATAGAAGGTG GAGAAATAGA AAATGTAAAC
CTAAAAACAT TAATAGAGGA TTTATGTGAA GATTTTAAAG TTAAGGGAGA TAAACAAGGG
ATATGCATTT CTAATAATTT AGAAGATATT GAGTTTATGT GTAGAGAAGA TGAAATAAGG
AGAATTATTA TAAATCTTTT AGATAATGCC ATAAAGTATT CAATAAAAGG TAGTGAAATA
GAGATTAGTC TATTTAAAGA TAAGGAAGAA AAGCATATAG AGATAGAGAA TTTAAGTGAT
GAGATTAGTA GTGAGGGAGT AGAAAAAATA TTTGAGCCAT TTTATAGAGA GAATACTAAA
AAATCTAGAG AGTTAGGGGG AAATGGGTTA GGTCTTTATA TATGCTCAGA GCTAGTAAAA
AAATATGGAG GAGATATTTC ATTTAATTAT TCTAACGGTA AGGTAAAGGT TAGTATTATT
TTTAAATAA
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| Protein sequence | MKVKHKFSGG FLIIFLIAFI ILNCFLGKAF INYHENKIKN EMDSLYKSSY SILRLYFQVN
NLEGNKGNFN RYIPKISNDI SEQGKCQIDV FNEDLEKEYS YYLDDFSFDY EKDGGYDVLK
EANKNKAALN IYRDENAVKA YLAFPVYVDE SFLGNILLSK DYSKEYLELR DLMSNIKFIV
SITFLLILIF TYFLFERIIN PLNYIKNSFK RIGDGDFKIN LKVNSKDEIG DLACGVNKMA
NKIEEQIEKI NEEKEKVLTL EKTRTEFFNN ITHELKTPLT NISGYAQIMS EEDFHDNDFR
KFALERINKE SKRMHELIVS LIEISKNKSD IEGGEIENVN LKTLIEDLCE DFKVKGDKQG
ICISNNLEDI EFMCREDEIR RIIINLLDNA IKYSIKGSEI EISLFKDKEE KHIEIENLSD
EISSEGVEKI FEPFYRENTK KSRELGGNGL GLYICSELVK KYGGDISFNY SNGKVKVSII
FK
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