Gene CPF_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2334 
Symbol 
ID4202738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2595773 
End bp2596666 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content32% 
IMG OID638083199 
ProductROK family protein 
Protein accessionYP_696757 
Protein GI110798611 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ATGTTGTTGT TGATATTGGA GGAACGAGTA TAAAACATGC TTTGATGACT 
GAAAGTGGAG ATATTTTAGA AAATGGAAGC ATGAAAACTG AAGGGGATAA TATAGATATT
TTTATTGAAT CCATAGGAAA AGTTGTTGAT TCATATAAAG AAAAAAATGA GGTTTTTGGA
TTAGCATGTA GTTCGCCAGG TGCTGTAGAT GTTAAAACAG GATTTATAGG GGGAGGAAGT
GCCATTCCTT GCATACATGG TCCAAATATA AAAGAGCTTT TAGAAAAAAG ATGTGGTTTA
GAGGTTTCTA TAGAAAATGA TGCAAATTGC GCTGGATTAG CGGAAGGATG GCTTGGATCA
GCTAAAGGAT TAGAAAATTA TGCATGTATT GTAATTGGCA CAGGAATAGG TGGATGCATA
GTTATAAATG GAAGAATTTT AAGAGGAAAG CATCTTCATG GGGGAGAATT TGGTTATATG
TTTACTAGAG ATAGTGAAGG ATTAACAGAT AGAATTTGGA GTGAAGTTTC TTCTACCAAT
GCTTTAGTTA CAAGGGTATC TAAATTAAAA GGAATAGAAA AATCAGAACT TGATGGAAAG
AAAGTTTTTG AAATGGCTGA AAATGGAGAC GAGGAAGTTA ATAAGGAAAT AGAATTATGG
TATATGGACC TTGCAAGGGG AATATACAAT ATTCAATATA TAGTTGACCC AGAAAAAATT
GTTATTGGGG GAGCTATAAG TGCTAGGGAT GGATTTGATA AGAAAATAAA TGAAAAACTT
GCTTTACTAA AAAGTGATAT AGCAACTTTA GATATAAGTG TTGAAAAATG CAAATTTCAA
AATGATTCAA ATTTAATAGG AGCATTATAT AACTTTCTTT TTGTTAGAAA ATAA
 
Protein sequence
MKKYVVVDIG GTSIKHALMT ESGDILENGS MKTEGDNIDI FIESIGKVVD SYKEKNEVFG 
LACSSPGAVD VKTGFIGGGS AIPCIHGPNI KELLEKRCGL EVSIENDANC AGLAEGWLGS
AKGLENYACI VIGTGIGGCI VINGRILRGK HLHGGEFGYM FTRDSEGLTD RIWSEVSSTN
ALVTRVSKLK GIEKSELDGK KVFEMAENGD EEVNKEIELW YMDLARGIYN IQYIVDPEKI
VIGGAISARD GFDKKINEKL ALLKSDIATL DISVEKCKFQ NDSNLIGALY NFLFVRK