Gene CPF_2325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2325 
SymbolgyrA 
ID4202991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2579683 
End bp2582622 
Gene Length2940 bp 
Protein Length979 aa 
Translation table11 
GC content30% 
IMG OID638083190 
ProductDNA topoisomerase IV subunit A 
Protein accessionYP_696748 
Protein GI110799869 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.582923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGA AGAATATTGA AATACCTAAG GATAATAATA TTATTAGAAT GCCTCTTGAA 
GAGGTTATGC CTGATAACTA TTTACCTTAT GCAGTAGAAG TTGCTAAGGA TAGAGCACTT
CCAGATGTAA GAGATGGATT AAAGCCTGTA CACAGAAGAA TTTTATATGG TGCATATATG
TTAAAGGCTT TTCCAGATAA ACCTTATTAC AAATCAGCTA GAATAGTAGG GGATATACTA
GGTAAATATC ACCCACATGG AGATAGTTCA GTTTATGATG CCATGGTAAT TCTAGCTCAA
AATTTTAGTA CAAGAGCTCC CCTTATTGAT GGACACGGAA ACTGGGGAAG TATAGATGGA
GATGGAGCAG CGGCTATGAG ATATACAGAG GCTAGACTTT CTAGTATATC TATGGAGATG
CTTAGAGATA TAGAAAAAAA TGTAGTAGAT ATGGTTCCAA ACTACTCAGA TTCTGAAATG
GAACCTAAGG TATTACCAGC TAGATATCCA AACCTTTTAG TAAATGGTAC TTTTGGTATA
GCAGTTGGAC TTTCAACTAA TATACCACCA CATAATTTAA GAGAAGTTAT AGATGGTACT
TTAGCTTATA TAGATAATAA TGAAATTACT ACTAGAGAAT TAATGAATTA TATAAAAGGG
CCAGATCTTC CAACAGGAGG AGTTTTAATT GGTGAGAAAA CTCTATTATC TGCTTATGAA
ACAGGTGAAG GAAAAGTAAC TTTAAGAGCT AAGGCTAAAA TTGAAACTTT AGAAAATGGA
AGACTTGGAA TAGTAATAAC TGAATTCCCT TATAGAAGAA ATAAGGCTAG AATACTTCAA
ACAATATCAG ATATGACTGG TGACAAGAGA CATGCTAAAG CTTTAGATGG AATAGTGGAT
ATTAGGGATG AGTCAGATAG AACTGGTATA AGAGCCGTAA TAGAATTTAA GAAGGCTGTA
GATCACGATA TGGCTGATAA GGTTCTTAAG TATCTTTATA AGAAAACTGA TCTTCAAGGT
AACATAAGCT TTAATATGGT TGCCTTAGCA GATGGAAAGC CAGAGACTAT GGGATTAAAA
ACAATAATAT CTCATTATGT AAACCATCAA AAGGATGTTG TTACAAGAAG AACAAAAAGA
GAGTTAGAAG TAGCAGAAAA GAGATTCCAC ATAGTTGAAG GTTTCATAAA GGCTATAGGA
ATAATGGATG AAGTTATAGC TACAATTAGA GCTTCAAAAT CAAAGAAAGA TGCTCATGAG
AATTTAGTTT CAAAATTTGG ATTTACTGAC TTACAGGCAG AGGCAATTCT AGAATTAATG
CTTTATAGAT TAACTGGATT AGAGATAAAA GTATTCCAAA AAGAGCATAA AGAGTTATCA
AAGAAAATAA AGGCACTTAG AAAAATTTTA GAAAATGAGT CAGTTCTTTT AGGTGTTATA
AAAGATGAAT TAAAAGAAGT GGCTGAAGTT TATGGTGATG AAAGAAGAAC TGCCTTAATA
GAAGATGAAA GCGAAGCTAA GATAGATTTA GAAGAGTTAA TAGTAGCAGA AGATGTTATG
GTTACTCTAT CAAATGAAGG ATTTATAAAG AAGCTTCCTC TTAAGACTTA TAATCGTTCA
AATGTTGATG AAAATGAAAT TGAATATAGA GAAGGAGATT ATTTAAAATT CCTTATTAAA
TCAAATACTA AGGATACCTT AGCTATATTC ACTGATAAGG GAACTGTTTA TCAAATAAAA
TGTAATTCTG TAGCAGATAA GAAATGGAAA GATAAAGGAG AAAGACTTGA GGATTTAATA
AGAGGATTAA GTTTAGAAGA TGAAAAAATT ATTGCTCTTG AATCAATTGA GAATTTCCTT
CCAAACAAAT GCTTTAAGTT TATAACTGCT AATGGATTAA TAAAGAAGAC TACTTTAGAT
AAATTTGTTA CTGCTTACTC AAAGCTGATG GCTATAAAGC TTAAGAATGA TGATTTATTA
GCAAGTGTAT CTTTAATAGA TTCACAGGAT GAAGAAAGAT TTGTTGAAAT TGAAACAACT
AATGGATTAA ACTTTGTTGT TTCAGAACCA GAATTAGAGT TTACAGATAG AAATATACTA
GGAGTTCAAT TAGTACCATT AAAGAGTGGT AACCAAATTA AGAGTATAAG ATTTGTAGAT
AACTATGAAT ATAAAGAATT CATCATAGGA ATAAATAAAA AGGGAAATAT AAAAACTTTC
AGTAATATGA ATAGCAATTC TTATGAAAAG GTAAAAGTTA ATTCATTTAG AAACATAATT
GCTTTCTCAA ATAAAGGAAA GGTATTTAAA TTCCCAGCAT ACTTACTTCA AAATACAGAA
GAAAGTAATA TTTCAGATTT AGTAGATGGA TTTGAAAAGG ATGAAATTAT AATAAAAGTA
GCACCTATAA ATGAGTTTGG AAAAATAGGT GAAGATTTAT TTGTTTACTT CTTCTCAAGA
GAAGGATTAG TTAAAAAGAC ATCTTTAAGA GAGTTCTTAG GAGAATTTAA TAATCAAATA
GCTTATAAGT TTAAAACTCC AAAGGATGAA TTAGTAAATG TAGATATAAA TTTTGAAAAT
GCTACAGTAA TCTTAGTAAC TAAGAATGGT ATGGGAATTA AATTTTTAGC TACAGCTATT
AATCCAATGG GAAGAGTAGC TTCAGGGGTA ACAGGAATAA GCTTAAAAGA TGATAATAAG
GTTATATTTG GTAAGGTTAT ACCACCATCT GAAGATATTG ATGATAAAAC TTTAGAGGCG
TATAATGACT ATAAAAAAGA ATTAACTAGT AATTATGAAA AACTTATTTT AGAGTCTAAG
CAAAAAGAAA AGGCTGAAGT CAATATTGAA GATATTAAAC TACAAAATAG AGCAGGAAGA
GGAAGTAGTT TAATGATTTT AGTATTGGAA GACTATATAA GGGACGTAAT TATTAAGTAG
 
Protein sequence
MAKKNIEIPK DNNIIRMPLE EVMPDNYLPY AVEVAKDRAL PDVRDGLKPV HRRILYGAYM 
LKAFPDKPYY KSARIVGDIL GKYHPHGDSS VYDAMVILAQ NFSTRAPLID GHGNWGSIDG
DGAAAMRYTE ARLSSISMEM LRDIEKNVVD MVPNYSDSEM EPKVLPARYP NLLVNGTFGI
AVGLSTNIPP HNLREVIDGT LAYIDNNEIT TRELMNYIKG PDLPTGGVLI GEKTLLSAYE
TGEGKVTLRA KAKIETLENG RLGIVITEFP YRRNKARILQ TISDMTGDKR HAKALDGIVD
IRDESDRTGI RAVIEFKKAV DHDMADKVLK YLYKKTDLQG NISFNMVALA DGKPETMGLK
TIISHYVNHQ KDVVTRRTKR ELEVAEKRFH IVEGFIKAIG IMDEVIATIR ASKSKKDAHE
NLVSKFGFTD LQAEAILELM LYRLTGLEIK VFQKEHKELS KKIKALRKIL ENESVLLGVI
KDELKEVAEV YGDERRTALI EDESEAKIDL EELIVAEDVM VTLSNEGFIK KLPLKTYNRS
NVDENEIEYR EGDYLKFLIK SNTKDTLAIF TDKGTVYQIK CNSVADKKWK DKGERLEDLI
RGLSLEDEKI IALESIENFL PNKCFKFITA NGLIKKTTLD KFVTAYSKLM AIKLKNDDLL
ASVSLIDSQD EERFVEIETT NGLNFVVSEP ELEFTDRNIL GVQLVPLKSG NQIKSIRFVD
NYEYKEFIIG INKKGNIKTF SNMNSNSYEK VKVNSFRNII AFSNKGKVFK FPAYLLQNTE
ESNISDLVDG FEKDEIIIKV APINEFGKIG EDLFVYFFSR EGLVKKTSLR EFLGEFNNQI
AYKFKTPKDE LVNVDINFEN ATVILVTKNG MGIKFLATAI NPMGRVASGV TGISLKDDNK
VIFGKVIPPS EDIDDKTLEA YNDYKKELTS NYEKLILESK QKEKAEVNIE DIKLQNRAGR
GSSLMILVLE DYIRDVIIK