Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2325 |
Symbol | gyrA |
ID | 4202991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2579683 |
End bp | 2582622 |
Gene Length | 2940 bp |
Protein Length | 979 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083190 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_696748 |
Protein GI | 110799869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.582923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGA AGAATATTGA AATACCTAAG GATAATAATA TTATTAGAAT GCCTCTTGAA GAGGTTATGC CTGATAACTA TTTACCTTAT GCAGTAGAAG TTGCTAAGGA TAGAGCACTT CCAGATGTAA GAGATGGATT AAAGCCTGTA CACAGAAGAA TTTTATATGG TGCATATATG TTAAAGGCTT TTCCAGATAA ACCTTATTAC AAATCAGCTA GAATAGTAGG GGATATACTA GGTAAATATC ACCCACATGG AGATAGTTCA GTTTATGATG CCATGGTAAT TCTAGCTCAA AATTTTAGTA CAAGAGCTCC CCTTATTGAT GGACACGGAA ACTGGGGAAG TATAGATGGA GATGGAGCAG CGGCTATGAG ATATACAGAG GCTAGACTTT CTAGTATATC TATGGAGATG CTTAGAGATA TAGAAAAAAA TGTAGTAGAT ATGGTTCCAA ACTACTCAGA TTCTGAAATG GAACCTAAGG TATTACCAGC TAGATATCCA AACCTTTTAG TAAATGGTAC TTTTGGTATA GCAGTTGGAC TTTCAACTAA TATACCACCA CATAATTTAA GAGAAGTTAT AGATGGTACT TTAGCTTATA TAGATAATAA TGAAATTACT ACTAGAGAAT TAATGAATTA TATAAAAGGG CCAGATCTTC CAACAGGAGG AGTTTTAATT GGTGAGAAAA CTCTATTATC TGCTTATGAA ACAGGTGAAG GAAAAGTAAC TTTAAGAGCT AAGGCTAAAA TTGAAACTTT AGAAAATGGA AGACTTGGAA TAGTAATAAC TGAATTCCCT TATAGAAGAA ATAAGGCTAG AATACTTCAA ACAATATCAG ATATGACTGG TGACAAGAGA CATGCTAAAG CTTTAGATGG AATAGTGGAT ATTAGGGATG AGTCAGATAG AACTGGTATA AGAGCCGTAA TAGAATTTAA GAAGGCTGTA GATCACGATA TGGCTGATAA GGTTCTTAAG TATCTTTATA AGAAAACTGA TCTTCAAGGT AACATAAGCT TTAATATGGT TGCCTTAGCA GATGGAAAGC CAGAGACTAT GGGATTAAAA ACAATAATAT CTCATTATGT AAACCATCAA AAGGATGTTG TTACAAGAAG AACAAAAAGA GAGTTAGAAG TAGCAGAAAA GAGATTCCAC ATAGTTGAAG GTTTCATAAA GGCTATAGGA ATAATGGATG AAGTTATAGC TACAATTAGA GCTTCAAAAT CAAAGAAAGA TGCTCATGAG AATTTAGTTT CAAAATTTGG ATTTACTGAC TTACAGGCAG AGGCAATTCT AGAATTAATG CTTTATAGAT TAACTGGATT AGAGATAAAA GTATTCCAAA AAGAGCATAA AGAGTTATCA AAGAAAATAA AGGCACTTAG AAAAATTTTA GAAAATGAGT CAGTTCTTTT AGGTGTTATA AAAGATGAAT TAAAAGAAGT GGCTGAAGTT TATGGTGATG AAAGAAGAAC TGCCTTAATA GAAGATGAAA GCGAAGCTAA GATAGATTTA GAAGAGTTAA TAGTAGCAGA AGATGTTATG GTTACTCTAT CAAATGAAGG ATTTATAAAG AAGCTTCCTC TTAAGACTTA TAATCGTTCA AATGTTGATG AAAATGAAAT TGAATATAGA GAAGGAGATT ATTTAAAATT CCTTATTAAA TCAAATACTA AGGATACCTT AGCTATATTC ACTGATAAGG GAACTGTTTA TCAAATAAAA TGTAATTCTG TAGCAGATAA GAAATGGAAA GATAAAGGAG AAAGACTTGA GGATTTAATA AGAGGATTAA GTTTAGAAGA TGAAAAAATT ATTGCTCTTG AATCAATTGA GAATTTCCTT CCAAACAAAT GCTTTAAGTT TATAACTGCT AATGGATTAA TAAAGAAGAC TACTTTAGAT AAATTTGTTA CTGCTTACTC AAAGCTGATG GCTATAAAGC TTAAGAATGA TGATTTATTA GCAAGTGTAT CTTTAATAGA TTCACAGGAT GAAGAAAGAT TTGTTGAAAT TGAAACAACT AATGGATTAA ACTTTGTTGT TTCAGAACCA GAATTAGAGT TTACAGATAG AAATATACTA GGAGTTCAAT TAGTACCATT AAAGAGTGGT AACCAAATTA AGAGTATAAG ATTTGTAGAT AACTATGAAT ATAAAGAATT CATCATAGGA ATAAATAAAA AGGGAAATAT AAAAACTTTC AGTAATATGA ATAGCAATTC TTATGAAAAG GTAAAAGTTA ATTCATTTAG AAACATAATT GCTTTCTCAA ATAAAGGAAA GGTATTTAAA TTCCCAGCAT ACTTACTTCA AAATACAGAA GAAAGTAATA TTTCAGATTT AGTAGATGGA TTTGAAAAGG ATGAAATTAT AATAAAAGTA GCACCTATAA ATGAGTTTGG AAAAATAGGT GAAGATTTAT TTGTTTACTT CTTCTCAAGA GAAGGATTAG TTAAAAAGAC ATCTTTAAGA GAGTTCTTAG GAGAATTTAA TAATCAAATA GCTTATAAGT TTAAAACTCC AAAGGATGAA TTAGTAAATG TAGATATAAA TTTTGAAAAT GCTACAGTAA TCTTAGTAAC TAAGAATGGT ATGGGAATTA AATTTTTAGC TACAGCTATT AATCCAATGG GAAGAGTAGC TTCAGGGGTA ACAGGAATAA GCTTAAAAGA TGATAATAAG GTTATATTTG GTAAGGTTAT ACCACCATCT GAAGATATTG ATGATAAAAC TTTAGAGGCG TATAATGACT ATAAAAAAGA ATTAACTAGT AATTATGAAA AACTTATTTT AGAGTCTAAG CAAAAAGAAA AGGCTGAAGT CAATATTGAA GATATTAAAC TACAAAATAG AGCAGGAAGA GGAAGTAGTT TAATGATTTT AGTATTGGAA GACTATATAA GGGACGTAAT TATTAAGTAG
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Protein sequence | MAKKNIEIPK DNNIIRMPLE EVMPDNYLPY AVEVAKDRAL PDVRDGLKPV HRRILYGAYM LKAFPDKPYY KSARIVGDIL GKYHPHGDSS VYDAMVILAQ NFSTRAPLID GHGNWGSIDG DGAAAMRYTE ARLSSISMEM LRDIEKNVVD MVPNYSDSEM EPKVLPARYP NLLVNGTFGI AVGLSTNIPP HNLREVIDGT LAYIDNNEIT TRELMNYIKG PDLPTGGVLI GEKTLLSAYE TGEGKVTLRA KAKIETLENG RLGIVITEFP YRRNKARILQ TISDMTGDKR HAKALDGIVD IRDESDRTGI RAVIEFKKAV DHDMADKVLK YLYKKTDLQG NISFNMVALA DGKPETMGLK TIISHYVNHQ KDVVTRRTKR ELEVAEKRFH IVEGFIKAIG IMDEVIATIR ASKSKKDAHE NLVSKFGFTD LQAEAILELM LYRLTGLEIK VFQKEHKELS KKIKALRKIL ENESVLLGVI KDELKEVAEV YGDERRTALI EDESEAKIDL EELIVAEDVM VTLSNEGFIK KLPLKTYNRS NVDENEIEYR EGDYLKFLIK SNTKDTLAIF TDKGTVYQIK CNSVADKKWK DKGERLEDLI RGLSLEDEKI IALESIENFL PNKCFKFITA NGLIKKTTLD KFVTAYSKLM AIKLKNDDLL ASVSLIDSQD EERFVEIETT NGLNFVVSEP ELEFTDRNIL GVQLVPLKSG NQIKSIRFVD NYEYKEFIIG INKKGNIKTF SNMNSNSYEK VKVNSFRNII AFSNKGKVFK FPAYLLQNTE ESNISDLVDG FEKDEIIIKV APINEFGKIG EDLFVYFFSR EGLVKKTSLR EFLGEFNNQI AYKFKTPKDE LVNVDINFEN ATVILVTKNG MGIKFLATAI NPMGRVASGV TGISLKDDNK VIFGKVIPPS EDIDDKTLEA YNDYKKELTS NYEKLILESK QKEKAEVNIE DIKLQNRAGR GSSLMILVLE DYIRDVIIK
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