Gene CPF_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2281 
Symbol 
ID4201715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2529454 
End bp2529798 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content34% 
IMG OID638083146 
ProductHIT family protein 
Protein accessionYP_696704 
Protein GI110800671 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATT GTATTTTTTG TAAAATAGTA GCTGGAGAAA TTCCAAGCAA AAAGATTTAT 
GAAGATGATA AAGTTTTAGC TTTTCATGAT ATAAGTCCAG AAGCACCAGT ACATTTTTTA
GTTATTCCTA AAGAACACAT AGCTAGTTTA AATGAAGTTA ATGAAGAAAA TGCAGAAGTA
TTTGCACACA TTTTCAAGAC TATTAATAAA CTAGTAAATG AACAAGGAAT TGCAGAGGAT
GGATACAGAG TTGTCACTAA TTGCGGAGAG CAAGGAGGGC AAACAGTAGG ACATATCCAT
TTCCACGTTC TTGGAGGAAG AAATTTAAAT TGGCCACCAG GCTAA
 
Protein sequence
MSDCIFCKIV AGEIPSKKIY EDDKVLAFHD ISPEAPVHFL VIPKEHIASL NEVNEENAEV 
FAHIFKTINK LVNEQGIAED GYRVVTNCGE QGGQTVGHIH FHVLGGRNLN WPPG