Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2273 |
Symbol | cdd |
ID | 4203602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2523237 |
End bp | 2523635 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083138 |
Product | cytidine deaminase |
Protein accession | YP_696696 |
Protein GI | 110800920 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AACTTATAAA AAAAGCTTTA GAGGCAAGAG AATTAGCATA TTGTCCATAT TCAAATTTTA AGGTAGGTGC AGCTGCTTTA TTTGAGGATG GTAAAATATA TACAGGATGC AATGTTGAAA ATGCATCATT TGGAGCAACA AACTGTGCTG AGAGGACTGC TATATTTAAA GGGGTTTCAG AAGGAGCAAG AGTCTTAAAG GCTATGGCTT TAGTAGGAGA TTTAAATTCA TACACATATC CATGTGGTAT ATGCAGACAA GTAATAGTAG AGTTTGCAGA GGATAAAGAT ATAAAAATAT TCATAGTAAA AAGTGAAGAT GATTATATAG AGACAACATT AGATGAAATT TTACCTGGAT CTTTCACTAA AAAGGATCTG GAAAAATAG
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Protein sequence | MKKELIKKAL EARELAYCPY SNFKVGAAAL FEDGKIYTGC NVENASFGAT NCAERTAIFK GVSEGARVLK AMALVGDLNS YTYPCGICRQ VIVEFAEDKD IKIFIVKSED DYIETTLDEI LPGSFTKKDL EK
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