Gene CPF_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2265 
SymboldnaG 
ID4203208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2513065 
End bp2514852 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content29% 
IMG OID638083130 
ProductDNA primase 
Protein accessionYP_696688 
Protein GI110799913 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0225159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATTT CAGAAGAAAT TATAGAAAAA GTTAAAGAGC AGAACGATAT TGTTGATGTT 
GTTTCTGATG TGGTAAGACT AAAAAGAACT GGAAGAAATT TTTCTGGTTT ATGTCCATTC
CATAATGAAA AAAGTCCATC TTTTAGTGTT TCTCCTGACA AACAAATATT TAAGTGCTTT
GGGTGTGGGG AAGCTGGAAA TGTAATAAGT TTTGTTATGA AAACTAAAAA TTTAAATTTT
GTAGATGCAG TTAAAGAGTT AGCTGATAGG GCTAATATAA TAATACCAAT AGAAGATGGT
AAGCAAAGCG AATCGCAAAA GAAAAAGCAG GTTTTATATA ACATAAATAA GCAAGCTGCT
AGATATTACT TTTCTAATCT TCAAAATAAT AAGGAAGCTA AGGAATATTT TTTAAGAAGG
GGAATAAAAG AAAATATATT AAAAAGCTTT GGTCTTGGAT ACGCTAAGGA TGGATGGCAA
AATACCATAA ACTATCTTAG AAAACAAGGC TTTAGTAATG AAGCTATTGA GGCAGCTGGA
TTAGGGATTA AGAGTGAAAA GGGAACTTTT TATGATAGAT TTAGAAATAG AGTTATTTTC
CCTGTATTTG ACTATAAAGG AAGTGTAATA GGTTTTGGTG GTAGAGTTTT AGATGATTCT
AAGCCAAAAT ATTTAAACTC TCCAGAAACA TTAGTCTTTC ACAAAGGAAC TAATCTATAT
GCTTTAAATT TTGCTATAAA GCATGGATTA CAGGAAAGAA CATTAATAAT AGTTGAAGGA
TATATGGATT GTATATCACT TCATCAATAT GGAATTACTA ATGTAGTTGC TTCTTTAGGT
ACTGCATTGA CAGACAATCA AGCTAGATTA TTAAAAAGGT ATGTAGACAG AGTAATAATA
TCCTATGACG CAGATATTGC TGGGCAAATG GCTACTATAC GTGGACTTGA GATATTGCAA
AATGCAGGAT TAGATGTTAG AGTACTAACT GTACCAAAAG GCAAAGATCC AGATGAATTT
ATAAGAGCTA ATGGTAAAGA GGCTTTTATA AAGTTAATTC AATCTTCAAA AAAACTTATA
GATTATAAGC TTCATAGGGC TAGAATTGGT ATAGATTTTT CAGATAATAA TGGATTAATA
AAGTATGCTG AAAGAGTTGT TAATATACTA TCAGATTTAA ATCCTATAGA AAAAGATGTC
TACATAAAGA GGATTTCAGA AGAAACATCC ATAAAAGAAC AAGCATTTTA TGATTTATTA
AATAAAAACT TAATAAATAG TAATAAAAAC CATGAAAATG TGAATAATAA GGAAGAATAT
GGAACAAAAT TATATGTAGA ACCTCCTTAT GTTAAATGTG AAAGAAGTGT TTTAAAACTT
CTTTGTATGG AGGAAAACCA TTCATTAGTA AAGAAATACT TAGAAGAGGA TGATTTAATA
TCTCCTAATA TTAAATCCTT AGAAAAGATA ATCAATGATT CAATTGAGGA AATAGGATTT
AATAACTTAG GAAAACATGT AGAAGCTAAG TGTGAAGATC CAAAAGTTTT AAAGGAATGG
TTAGAAGTAA AAGACTTACT TATTCTAGAT CATTCTTCTA ATATAGAAGT TCTTGTTAAA
GATTATATTA ATCTTATTAG AAAATATAAG TTAGAACAGG AGCAGACTAC TGTACTTAAA
GAATTAAAAA GATGTGAACA AAACAATATG TTTAAAGAGT CACTTGATTT AGTAAAAAGA
GCTAAAGAAA TAAGTGATAA ATTAAAAGAA CTAGAAAGGA GTAAGTAG
 
Protein sequence
MRISEEIIEK VKEQNDIVDV VSDVVRLKRT GRNFSGLCPF HNEKSPSFSV SPDKQIFKCF 
GCGEAGNVIS FVMKTKNLNF VDAVKELADR ANIIIPIEDG KQSESQKKKQ VLYNINKQAA
RYYFSNLQNN KEAKEYFLRR GIKENILKSF GLGYAKDGWQ NTINYLRKQG FSNEAIEAAG
LGIKSEKGTF YDRFRNRVIF PVFDYKGSVI GFGGRVLDDS KPKYLNSPET LVFHKGTNLY
ALNFAIKHGL QERTLIIVEG YMDCISLHQY GITNVVASLG TALTDNQARL LKRYVDRVII
SYDADIAGQM ATIRGLEILQ NAGLDVRVLT VPKGKDPDEF IRANGKEAFI KLIQSSKKLI
DYKLHRARIG IDFSDNNGLI KYAERVVNIL SDLNPIEKDV YIKRISEETS IKEQAFYDLL
NKNLINSNKN HENVNNKEEY GTKLYVEPPY VKCERSVLKL LCMEENHSLV KKYLEEDDLI
SPNIKSLEKI INDSIEEIGF NNLGKHVEAK CEDPKVLKEW LEVKDLLILD HSSNIEVLVK
DYINLIRKYK LEQEQTTVLK ELKRCEQNNM FKESLDLVKR AKEISDKLKE LERSK