Gene CPF_2258 details

Gene Information

• Locus tag: CPF_2258
• ID: 4202212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2506548
• End bp: 2507237
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 638083123
• Product: radical SAM domain-containing protein
• Protein accession: YP_696681
• Protein GI: 110798690
• COG category: [R] General function prediction only
• COG ID: [COG1244] Predicted Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATAGAT ATAATGTTAT AGATAATAAA AATAATAGAG AGATAGTTCT TCTAAAATCT 
TTTCCTTGTG TATGGGGAAA GTGTGCCTTT TGTGATTATA TAGAAGATAA CTCAAAAAAT 
ACTGAAGAGA TAATAAAATT AAATAAAGAA GTTCTTAGCA ATGTAAAAGG AATTTATGGA 
GTTTTAGAAG TAATAAACTC TGGAAGTGTT TTTGAACTTC CGAAGGAAAC CTTAGAAGAG 
ATAAAAAGGA TTGTTGTTGA GAAAAATATT AAAAAACTTT TCTTTGAAGC ACATTGGTGT 
TATAGAAATA GATTAAAGGA GATAGAAGAA TACTTTGGAG TTCCTATAAT ATTTAAAACT 
GGTATTGAAA CCTTTGATAA TCATTTTAGA AATGATATTT TAAACAAGAA TGCTAGATTT 
AATGATGTAG AAGAAGTAAA AAAATACTTT AAGTCAATAT GCTTAATGGT TGGAATAAAG 
GGACAAACTA AGGATATGAT AAAGAGAGAT ATGGACATAC TTTTAAATAA TTTTAAGTAT 
GGAACAGTTA ATATATGGAC TGAAAACACA ACTTCTTTCA AAAGAGACGA GGAGCTTATT 
AAATGGTTTG AAAAAGAGTA TTCTTTCTTA AAGGATAATA AAACCATAGA AGTATTATTT 
GAAAATACAG ACTTTGGGGT AGGAGATTAG 

 

Protein sequence

MDRYNVIDNK NNREIVLLKS FPCVWGKCAF CDYIEDNSKN TEEIIKLNKE VLSNVKGIYG 
VLEVINSGSV FELPKETLEE IKRIVVEKNI KKLFFEAHWC YRNRLKEIEE YFGVPIIFKT 
GIETFDNHFR NDILNKNARF NDVEEVKKYF KSICLMVGIK GQTKDMIKRD MDILLNNFKY 
GTVNIWTENT TSFKRDEELI KWFEKEYSFL KDNKTIEVLF ENTDFGVGD