Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2250 |
Symbol | polA |
ID | 4202541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2496982 |
End bp | 2499582 |
Gene Length | 2601 bp |
Protein Length | 866 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638083115 |
Product | DNA polymerase I |
Protein accession | YP_696673 |
Protein GI | 110799426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.177355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT TATTGATATT AGACGGGAAC AGTCTTTTAA ATAGAGCCTT TTATGCTGTG CCTTTGCTTA GCAATAGTGA AGGAACTCAT ACAAATGCTA TTTATGGTTT TACAAATATG CTTTTTAAGA TGAGAGAGGA TATAAAACCT GATTATATAG TTTGTACTTT TGATAAAAAA GCACCAACTT TTAGACATTT AGAGTATGGG GATTATAAGG CTGGAAGAAA GAAAATGCCT CCTGAGTTAG CAGAGCAGTT TCCTATTGTT AAGGAAATGC TAAAGTTATT TTCAATAACA ACTTATGAAT TAGATGGATT CGAAGCAGAT GATATTATAG GAAGTTTAGC TAAGGTGGCT GAAGGTGAAG GAATCGAAGT TTATATTATG ACTGGAGATA AGGATGCCCT TCAACTAGCA GCTAAGGATA TAAATGTATG TATAACTAAG AAGGGTGTTT CTGAAATAGA AGTTTATAAC TATGATAGAA TGGTTGAAGA ATATGGAGTT ACTCCTACTC AGTTCATAGA TGTTAAAGGA CTTATGGGAG ATAAATCTGA TAATATTCCA GGGGTACCAG GAGTAGGAGA AAAAACAGCC TTTAAATTAA TAAAAGAGTA TGGTTCAGTA GAGGCAGTTT TAGAAAATAT AGATAACATA AGTGGTAAAA AGTTAAAAGA AAATTTAACT GAGTACAGCG AACAGGCTAT ATTCTCTAAA AAGTTAGCTA CTATTATGAC TAATGTTCCT ATAGATTTTG ATTTAGATGA GATTAAATCA AAGGATGATT ATAATAAAGA TCAGTTAAAA GCTTTATTTA CAAAGCTTCA AATGAAATCT ATATTAGATA AATTATCAAA TGGGGAAGAA GAAGAGCCAG AAATAGAAGT TAAAATAACT AATATAGAAA ATAGTAAAGA ATTAGAAGAG TTATTTAAGA ATATAAACGA AGAAGTATAT ATTAATTTTA CTTATTTAAA TAAAGAAAAG TATTCTACTA TAGAGATTGA TAAAATATTT ATTAATTATG ATGAGAAAAA TTATTTAATT AACTTTAAAG AGTTAGTAAA AGAAGAGGAG AATATTAAAT CCTTTAAAGA ATTTTTTGAG AATGAAGATA TATTAAAAAA TGGCTATAGT ATAAAAAATG CCTTAACAGC ATTAAAAAAA TTAGGAATAG ATTTTAATGG ATTAGCCTTT GATTGTGAAT TAGCAGCATA TTTAATAGAT TCATCTAAGG GAGAATATAC TCTTTTATCC TTAATAAATA ACTATCTTTC AAAATTCCCT AATGTAAAAG AGGGGGAAGA AGACTTAGTT GGAATTTCAT TTATGAAAGA GTTGACTTTA GTTCTAAAGA AAAAGATAGA AGAAGAGAAA ATGGAAAGAC TTATGTATGA TATTGAGCTT CCTTTAGAAA CAGTTTTATC TTCTATGGAA TCAATAGGGT TTAAAGTAAA TAAAAATATT TTAGATGAGC TATCTATTAA GTTTAAAAGA GAGTTAGAGG AAACACAAAA AGAGATCTTT GAACTTGCAG ATGAAGAGTT CAACATAAAT TCTCCAAAAC AATTAGGTAA GATATTATTT GAAAAATTAG ATTTACCAGT TATAAAGAAA ACTAAAACTG GCTATTCAAC TAACGCAGAA GTTTTAGAAA AGCTTAAGGA CAAACATCCT ATAATAGAAA AAATAACATA TTTTAGACAG CTTTCAAAAA TATATTCAAC TTATGTTGAA GGATTAAAGT CTGTTATAGA TACAGATGGT TCTATACATT CAACATTTAA TCAAACTGTA ACTACTACAG GTAGACTTTC ATCAACAGAG CCTAATCTTC AAAATATACC TATAAAATAC GAAATGGGTA GAGAAATAAG AAAGGTATTT ATACCAAAAG AAGAAGGAGA TTTATTAATA TCAGCTGACT ACTCACAAAT AGAACTTAGA GTTTTAGCTC ATATTTCTGG TGATGAAAAT ATGATAGATG CATTTAATCA TCATTCAGAT ATACACACTA AGACTGCTTC TGAAGTATTT AAAGTTCCAG TTGAAGAGGT AACTCCATTA ATGAGAAGTA GGGCTAAGGC AGTAAACTTT GGTATAGTAT ATGGAATAGG AGATTTTAGT CTTTCACAGG ATTTAAATAT TTCAAGAAAA GAAGCTAAAG AATATATGGA TATATATTTT GAAAGATATC CAAAAATTAA AGAGTATATT TCTAAGGTTA TTCATGAAGC TCAAACAAAG GGATATGTAT TAACTATGTT AAATAGAAGA AGATATATAC CTGAAGCAAA TTCTTCAAAT AAAATAGTAA AAGCCTTAGG AGAAAGACTT GCAATGAATG CTCCAATACA AGGAACAGCA GCAGATATAA TAAAACTTGC TATGGTAAAT GTATATAACA AGTTAAAAGA ATTAAATTTA AATAGTAAGT TAATATTACA GGTTCATGAT GAACTTATAA TAAATGTTGT AAAAGGAGAA TTAGACATTG TTAAGAAACT TCTAAAAGAG GAAATGGAAA ATACAATTAA ATTAAGTGTA CCATTAGATG TTGATGTTAA TGTTGGAGAA GATTGGTATA AGTTAAAATA A
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Protein sequence | MKRLLILDGN SLLNRAFYAV PLLSNSEGTH TNAIYGFTNM LFKMREDIKP DYIVCTFDKK APTFRHLEYG DYKAGRKKMP PELAEQFPIV KEMLKLFSIT TYELDGFEAD DIIGSLAKVA EGEGIEVYIM TGDKDALQLA AKDINVCITK KGVSEIEVYN YDRMVEEYGV TPTQFIDVKG LMGDKSDNIP GVPGVGEKTA FKLIKEYGSV EAVLENIDNI SGKKLKENLT EYSEQAIFSK KLATIMTNVP IDFDLDEIKS KDDYNKDQLK ALFTKLQMKS ILDKLSNGEE EEPEIEVKIT NIENSKELEE LFKNINEEVY INFTYLNKEK YSTIEIDKIF INYDEKNYLI NFKELVKEEE NIKSFKEFFE NEDILKNGYS IKNALTALKK LGIDFNGLAF DCELAAYLID SSKGEYTLLS LINNYLSKFP NVKEGEEDLV GISFMKELTL VLKKKIEEEK MERLMYDIEL PLETVLSSME SIGFKVNKNI LDELSIKFKR ELEETQKEIF ELADEEFNIN SPKQLGKILF EKLDLPVIKK TKTGYSTNAE VLEKLKDKHP IIEKITYFRQ LSKIYSTYVE GLKSVIDTDG SIHSTFNQTV TTTGRLSSTE PNLQNIPIKY EMGREIRKVF IPKEEGDLLI SADYSQIELR VLAHISGDEN MIDAFNHHSD IHTKTASEVF KVPVEEVTPL MRSRAKAVNF GIVYGIGDFS LSQDLNISRK EAKEYMDIYF ERYPKIKEYI SKVIHEAQTK GYVLTMLNRR RYIPEANSSN KIVKALGERL AMNAPIQGTA ADIIKLAMVN VYNKLKELNL NSKLILQVHD ELIINVVKGE LDIVKKLLKE EMENTIKLSV PLDVDVNVGE DWYKLK
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