Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2248 |
Symbol | |
ID | 4203598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2495811 |
End bp | 2496356 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083113 |
Product | Slt family transglycosylase |
Protein accession | YP_696671 |
Protein GI | 110800916 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.469686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TTATAAGGCT AGTTATAATT GTTTTAGCCA TATATTTACT ATTTTTAGGG AGTGGATATA TATTAAAAAA TGTTATATTT CCATTAAAAT ATATAAATTA TGTAGAGAAA TATAGTAAAG AGTATAATTT GGATCCTTAT TTTGTCATGG CAGTTATGAA AGCAGAAAGT AACTTTGACG AAGATGCTAA ATCTAATAAG GACGCAAGAG GGCTTATGCA AATTACCACC TCTACTGGAA AGTGGATAGC TGAAAAACAA GGGATTATTG ATTTTGATAC CAATTTATTA TTAGAGCCAG AAGTTAATAT AAGGTTTGGA TGTTGGTATT TAAATAATCT TCATAAAGAG TTTGGAGATT GGGACCTTGT AATTGCAGCT TACAATGCAG GAAGAGGACG GGTTCAAGAA TGGCTTAATA GTGCTGAACA TTCTGATGAT GGAAAAAATC TTACTTATAT ACCATTTAAA GAAACTGATA AATATGTTAA AAAAGTAAAT GTTTATTACA ATATATATAG GTCACTTTAT TCTTAA
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Protein sequence | MKKIIRLVII VLAIYLLFLG SGYILKNVIF PLKYINYVEK YSKEYNLDPY FVMAVMKAES NFDEDAKSNK DARGLMQITT STGKWIAEKQ GIIDFDTNLL LEPEVNIRFG CWYLNNLHKE FGDWDLVIAA YNAGRGRVQE WLNSAEHSDD GKNLTYIPFK ETDKYVKKVN VYYNIYRSLY S
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