Gene CPF_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2247 
Symbol 
ID4201691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2494644 
End bp2495759 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content26% 
IMG OID638083112 
Productglycosy hydrolase family protein 
Protein accessionYP_696670 
Protein GI110798638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT GGCTAATAGC TATAGGTGGT ATTTTAATAA TTGCTATTTT TATATTATTT 
TTTAATAGAG AATATTTAAA ACCAGTACAT ATGGATATTA ATTGGAATGA TAATTTTAAT
CCACCAGAAG AAAAAATGCT TTTTGATTTT ATAGAGAAGG ATTTAAGTAA AAGTGGATAT
GGAATATATA CAAATTATAT AGATAAAAGT TCAGAAGGAG ATATAACTAA GGGTCACTCA
GTATTATCAG AGTCAGAGGG GCTTATGATG TTATATTCAG TAAATGCTAA TAATAAAGAA
TTATTTGATG AGCATTTTGA CATAGTAAAA GAAATGAGAT TAAAAAATGG ACTTATTAGT
TGGAGAAAAG AAGGAGATGA GAATTCACCT TCCTCTGCAA CCATAGATGA ACTTAGAATA
ATAAAAGCTC TTCTTTTAGC CAACAACAGA TGGAATAGTT TTTATTATAA ATTTTATGCT
ATAAATATTG CTAACTCTTT ACTTAAACAT GCAGAAGAAA ATGAAACTTT AGTAGATTAT
ATAGATAACT ATGGAAAAGG TAATACAACC ACTTTATGTT ATTTAGACTT GCCTACTATG
AAATTATTGA GTCAAGTGGA TAAGAAGTGG GAAGGAATTT ATGAAAAATC TAACAGTATA
ATAGAAAATG GAAAAATATC TGAAGAGGTT CCTTTATACA GAAAAGTATT TTATGAAGAA
ACTCAAAAAT ATGATGAAGA AGAAAATGTT GATTTCTTAT TATCTACAAT AGTAATTTTA
AATAGAATTG AAGCTGGAGA AAATGAGGAG TCATCTATTA AATGGATAAA AGAAAAGTTT
AAGAAAGATG GATTCTTAGT AGCTACCTAC AATGGTAAAA ATGGAGATGC TACCTCACAG
ATTGAATCTC CATCAATATA CTCTAATGTA GCTTTAATAG CAAATTACAT TGGAGATAAG
GAATTATTTA ACAAGGCTAT AGATAAATTA AAATATTATC AAATAAAAAA TAAAGATAGT
GTACTTTATG GTGGATTTGG AGATGAAAAG ACAAATAGCG TATATTCTTT TGATAATTTA
AATGCCTTAC TAGCTTTTCA AAAATATAAG GATTAA
 
Protein sequence
MKKWLIAIGG ILIIAIFILF FNREYLKPVH MDINWNDNFN PPEEKMLFDF IEKDLSKSGY 
GIYTNYIDKS SEGDITKGHS VLSESEGLMM LYSVNANNKE LFDEHFDIVK EMRLKNGLIS
WRKEGDENSP SSATIDELRI IKALLLANNR WNSFYYKFYA INIANSLLKH AEENETLVDY
IDNYGKGNTT TLCYLDLPTM KLLSQVDKKW EGIYEKSNSI IENGKISEEV PLYRKVFYEE
TQKYDEEENV DFLLSTIVIL NRIEAGENEE SSIKWIKEKF KKDGFLVATY NGKNGDATSQ
IESPSIYSNV ALIANYIGDK ELFNKAIDKL KYYQIKNKDS VLYGGFGDEK TNSVYSFDNL
NALLAFQKYK D