Gene CPF_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2244 
Symbol 
ID4202886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2492719 
End bp2493639 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content29% 
IMG OID638083109 
Productalpha/beta fold family hydrolase 
Protein accessionYP_696668 
Protein GI110800302 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGAAA ATTTTATATT TAAAGATGAT GAAGGATTAG AATTACAAGG ATATAAATGG 
AGTAATGGTA AAGAATTTAA GGCAGTTATT CACATATTAC ATGGAATGAC AGAGGATGCT
ATTAGATATG ATGAATTTGC AGAAAAACTT GTTGAAGCAG GATTTTTAGT TTATGCTCAT
GACCATAGAG GGCATGGCTT TACAGCTAAG GATTTAGATT CTTTAGGATA TCAAGCAGAA
AATGATGGTT TCCAATGGAT GATTGATGAT GCTAAAACTT TAATAGAGTC TTCTAAAGAA
AAACATAAAG GATATAAAAT AATACTTTTT GGACATAGTA TGGGATCTTT TGTAAGTCAG
AGGCTAGTTC AAGAATATAA TGATTTAGTG GATGTTTTGA TTTTATCGGG AACTAATGGT
GAGCCAGATA AGTTAGCCCC ACTTGGAGAA TTTGTAGCTC AAGTAGAAAT GTCATTAAAG
GGAAGAGAAC ATAAAAGTAA ACTTATGGAC AAGTTGATTT TTGGAGGCTT TAATAAGAAT
TTTAAACCAA ATAGGACAGA TTTTGATTGG CTTTGTAGTG TAGAAAGTGA AGTAGACAAG
TATATAGAAA ATGAAAGATA TGGTTTTATA TGTTCAAGTT CCTTTTATTA CGATTTGTTA
AGAGGGGTAA GAAGCATACA TAAAGCTGAA AATATGAATA GAATAAATAA AGAAATGCCT
ATTTATATTT TCGGAGGAGA TAAAGATCCA GTAGGTAATT TTGGTAAAGG TGTAATCAAC
TTAAAAGATA AATTAGAAAA AGTAGGAGTA AAAAATATTG AGTATAAGCT ATATGAAAAT
GGAAGACATG AAATGTTAAA TGAAAAAAAT AAAGTAGAAG TTATGGAAGA TACTATTCAG
TGGTTGTTGA AAAATATTTA A
 
Protein sequence
MRENFIFKDD EGLELQGYKW SNGKEFKAVI HILHGMTEDA IRYDEFAEKL VEAGFLVYAH 
DHRGHGFTAK DLDSLGYQAE NDGFQWMIDD AKTLIESSKE KHKGYKIILF GHSMGSFVSQ
RLVQEYNDLV DVLILSGTNG EPDKLAPLGE FVAQVEMSLK GREHKSKLMD KLIFGGFNKN
FKPNRTDFDW LCSVESEVDK YIENERYGFI CSSSFYYDLL RGVRSIHKAE NMNRINKEMP
IYIFGGDKDP VGNFGKGVIN LKDKLEKVGV KNIEYKLYEN GRHEMLNEKN KVEVMEDTIQ
WLLKNI