Gene CPF_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2241 
Symbol 
ID4201688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2487630 
End bp2489666 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content22% 
IMG OID638083106 
Productsensor histidine kinase 
Protein accessionYP_696665 
Protein GI110798635 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00553102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATATA AAGTAGAATA TGAAAATCCT AAATTACAAT ATTATATATT AAGAATAATA 
TATATATTAA TAATACTATC AGCAGTATTG TTTATAAGAA AAGAAAAATA TATTATGTTT
TATAAATTTT TAGACTTGTC TTCAGTAATA ATGTTAGGAA CCTCATTATT AATAGGAATA
AGCAGTAATG TAGATAAGGA AAAAAACTTA GTTTCTTATA CTAATATGGG TATATTTTGG
ATTATTATTC CTGAGGTTTT TTCTTCATTT GTTTCCTTGG AGTTATATGT AGTAGATAAG
ATGATAGCTT ATAAAATAAT AGGCCTATTA TTTCAGTATT TTATTACCTT TGTAATAGTT
TTAGGGAAGA AAAAGGACTT AGCTTTTAAG AAAATAAATA AAATTTTTCT ATTATTAAAT
ATTATCTTTA ACATTATTTA TCTCATAGTA ATAAATAATA CAAAATTAAT GAGAGCTTTT
ATTAAAGGTG TATATATAAA TAATTTTATG TTTATATTGA TTGTTATTTT ATTTTTAATA
TTATTAATAG TAATTGTTGC TGATAAAGAA AATACATCTG ATAAATTCTT TTATTATTTA
ATTGCTTATA TATTATTATT CTCAGTAGGA AATATTATTT TATTAAATAA TTTTCATAAT
TTAAGAAATA CTTATTTATT AGGAGTTTCC TTTAGTCAAA TACTAGACTT CTCAGCATAT
TACATTTTAG TAGAAGGTAT AATAAGATTT TCTTTAAATA AGAATTTTAA TAATATAAAT
AGGATAATGC TCTTAAAAAG AGGTGAATTT AAGAGAAATA AAAGGTATTT AAGAAAAAAA
ATAGAGGAGC TAAAAGAATT AGAGAATCTT TTAGATAGAG AAGAATTGTT GTTTAATAAT
ATTACTTCAG CCATTGGAGA CTATATATTT ATTTCTAAGG ATGAAAAATT ATTTTATTTA
AACGACGAAG CCTTGGAATT TTTAGAAGTT GAAAACAAAG AATCTATATT GTTTGAAAGT
ATGGAAGTAT TATATGAAAA AATACTAGAA AAGCAAGTTT ATTTAAAAGA GAAAGGAAGT
ATGGATTCTT ATAAAGAAAT AATTTTTAAA AATATTAAGG GAGGCTACTC TAATGGAGAA
TTTTACACAA TACCTTTTGG AGATAATTAT AAAATTATAA TTATAAATGA TATTACCAAA
AAGAATAATG CTTTAAGATT AAATAAGTAT TTAAAAGATA AATTGGAAGA AGAAAATATA
AAAGGGGAAT TTTTTACAAA TATATGTCAT GAGTTAAGGA CTCCTATAAA TGTAATAAGT
TCAGCTCTTC AATTAAATAA TTTAAATATA GAAAATAAAA ATCTTAATTC TATAGAAAGA
AATAACCTAG TAATTAAACA AAATTGTTTA AGACTTATAA GGACAATAAA TAATTTCATT
GATGCTAATA AAATATCAGA GGGACAGATA GAAGAAAACG TTATGGTTCT TAATGTAGTT
GAAGTTGTTG AAAATATATT AGATGCCTCT TCAGAATATA TAAGTAAGAA AAAAATAAAT
TTTGTTTTTG ATCCTGATTT TGAAGAGATA TTTATAGCTA TTGATAGTGA GTTTTTAGAA
AGAATAATAT TAAATCTATT ATCAAATTCA GTAAAGTATG GAAGTGAAAA TGGAAACATA
TATGTGAAAA TATATTTTGA AGGAAAAGAT CTTGTAATAA TGATAGAAAA TGATGGAATA
GCTATAAGTT ATGATGAACA AAAATATATT TTTGACAAAT TTACTAAAAG TAATAAGGCT
TTAAATAGAA CACAAGAAGG AAGTGGGTTA GGGCTTTATA TAAGTAAATC TCTTATGAAA
ATGCAAGGAG GGGATTTAAA GGTTGATATA TATGAGGGAC ATGGAAATAG ATTTAAATTA
TATTTTTATG ATGTAGATTT ATTTAAGGAA ACTGATAGAA CTGAACATAT TTTTAATAAC
AATTACTATA ACTTAAAGGA AAGAGCTGAA ATTGAATTTT CTGATATATA CATATAA
 
Protein sequence
MEYKVEYENP KLQYYILRII YILIILSAVL FIRKEKYIMF YKFLDLSSVI MLGTSLLIGI 
SSNVDKEKNL VSYTNMGIFW IIIPEVFSSF VSLELYVVDK MIAYKIIGLL FQYFITFVIV
LGKKKDLAFK KINKIFLLLN IIFNIIYLIV INNTKLMRAF IKGVYINNFM FILIVILFLI
LLIVIVADKE NTSDKFFYYL IAYILLFSVG NIILLNNFHN LRNTYLLGVS FSQILDFSAY
YILVEGIIRF SLNKNFNNIN RIMLLKRGEF KRNKRYLRKK IEELKELENL LDREELLFNN
ITSAIGDYIF ISKDEKLFYL NDEALEFLEV ENKESILFES MEVLYEKILE KQVYLKEKGS
MDSYKEIIFK NIKGGYSNGE FYTIPFGDNY KIIIINDITK KNNALRLNKY LKDKLEEENI
KGEFFTNICH ELRTPINVIS SALQLNNLNI ENKNLNSIER NNLVIKQNCL RLIRTINNFI
DANKISEGQI EENVMVLNVV EVVENILDAS SEYISKKKIN FVFDPDFEEI FIAIDSEFLE
RIILNLLSNS VKYGSENGNI YVKIYFEGKD LVIMIENDGI AISYDEQKYI FDKFTKSNKA
LNRTQEGSGL GLYISKSLMK MQGGDLKVDI YEGHGNRFKL YFYDVDLFKE TDRTEHIFNN
NYYNLKERAE IEFSDIYI