Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2241 |
Symbol | |
ID | 4201688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2487630 |
End bp | 2489666 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 638083106 |
Product | sensor histidine kinase |
Protein accession | YP_696665 |
Protein GI | 110798635 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00553102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAATATA AAGTAGAATA TGAAAATCCT AAATTACAAT ATTATATATT AAGAATAATA TATATATTAA TAATACTATC AGCAGTATTG TTTATAAGAA AAGAAAAATA TATTATGTTT TATAAATTTT TAGACTTGTC TTCAGTAATA ATGTTAGGAA CCTCATTATT AATAGGAATA AGCAGTAATG TAGATAAGGA AAAAAACTTA GTTTCTTATA CTAATATGGG TATATTTTGG ATTATTATTC CTGAGGTTTT TTCTTCATTT GTTTCCTTGG AGTTATATGT AGTAGATAAG ATGATAGCTT ATAAAATAAT AGGCCTATTA TTTCAGTATT TTATTACCTT TGTAATAGTT TTAGGGAAGA AAAAGGACTT AGCTTTTAAG AAAATAAATA AAATTTTTCT ATTATTAAAT ATTATCTTTA ACATTATTTA TCTCATAGTA ATAAATAATA CAAAATTAAT GAGAGCTTTT ATTAAAGGTG TATATATAAA TAATTTTATG TTTATATTGA TTGTTATTTT ATTTTTAATA TTATTAATAG TAATTGTTGC TGATAAAGAA AATACATCTG ATAAATTCTT TTATTATTTA ATTGCTTATA TATTATTATT CTCAGTAGGA AATATTATTT TATTAAATAA TTTTCATAAT TTAAGAAATA CTTATTTATT AGGAGTTTCC TTTAGTCAAA TACTAGACTT CTCAGCATAT TACATTTTAG TAGAAGGTAT AATAAGATTT TCTTTAAATA AGAATTTTAA TAATATAAAT AGGATAATGC TCTTAAAAAG AGGTGAATTT AAGAGAAATA AAAGGTATTT AAGAAAAAAA ATAGAGGAGC TAAAAGAATT AGAGAATCTT TTAGATAGAG AAGAATTGTT GTTTAATAAT ATTACTTCAG CCATTGGAGA CTATATATTT ATTTCTAAGG ATGAAAAATT ATTTTATTTA AACGACGAAG CCTTGGAATT TTTAGAAGTT GAAAACAAAG AATCTATATT GTTTGAAAGT ATGGAAGTAT TATATGAAAA AATACTAGAA AAGCAAGTTT ATTTAAAAGA GAAAGGAAGT ATGGATTCTT ATAAAGAAAT AATTTTTAAA AATATTAAGG GAGGCTACTC TAATGGAGAA TTTTACACAA TACCTTTTGG AGATAATTAT AAAATTATAA TTATAAATGA TATTACCAAA AAGAATAATG CTTTAAGATT AAATAAGTAT TTAAAAGATA AATTGGAAGA AGAAAATATA AAAGGGGAAT TTTTTACAAA TATATGTCAT GAGTTAAGGA CTCCTATAAA TGTAATAAGT TCAGCTCTTC AATTAAATAA TTTAAATATA GAAAATAAAA ATCTTAATTC TATAGAAAGA AATAACCTAG TAATTAAACA AAATTGTTTA AGACTTATAA GGACAATAAA TAATTTCATT GATGCTAATA AAATATCAGA GGGACAGATA GAAGAAAACG TTATGGTTCT TAATGTAGTT GAAGTTGTTG AAAATATATT AGATGCCTCT TCAGAATATA TAAGTAAGAA AAAAATAAAT TTTGTTTTTG ATCCTGATTT TGAAGAGATA TTTATAGCTA TTGATAGTGA GTTTTTAGAA AGAATAATAT TAAATCTATT ATCAAATTCA GTAAAGTATG GAAGTGAAAA TGGAAACATA TATGTGAAAA TATATTTTGA AGGAAAAGAT CTTGTAATAA TGATAGAAAA TGATGGAATA GCTATAAGTT ATGATGAACA AAAATATATT TTTGACAAAT TTACTAAAAG TAATAAGGCT TTAAATAGAA CACAAGAAGG AAGTGGGTTA GGGCTTTATA TAAGTAAATC TCTTATGAAA ATGCAAGGAG GGGATTTAAA GGTTGATATA TATGAGGGAC ATGGAAATAG ATTTAAATTA TATTTTTATG ATGTAGATTT ATTTAAGGAA ACTGATAGAA CTGAACATAT TTTTAATAAC AATTACTATA ACTTAAAGGA AAGAGCTGAA ATTGAATTTT CTGATATATA CATATAA
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Protein sequence | MEYKVEYENP KLQYYILRII YILIILSAVL FIRKEKYIMF YKFLDLSSVI MLGTSLLIGI SSNVDKEKNL VSYTNMGIFW IIIPEVFSSF VSLELYVVDK MIAYKIIGLL FQYFITFVIV LGKKKDLAFK KINKIFLLLN IIFNIIYLIV INNTKLMRAF IKGVYINNFM FILIVILFLI LLIVIVADKE NTSDKFFYYL IAYILLFSVG NIILLNNFHN LRNTYLLGVS FSQILDFSAY YILVEGIIRF SLNKNFNNIN RIMLLKRGEF KRNKRYLRKK IEELKELENL LDREELLFNN ITSAIGDYIF ISKDEKLFYL NDEALEFLEV ENKESILFES MEVLYEKILE KQVYLKEKGS MDSYKEIIFK NIKGGYSNGE FYTIPFGDNY KIIIINDITK KNNALRLNKY LKDKLEEENI KGEFFTNICH ELRTPINVIS SALQLNNLNI ENKNLNSIER NNLVIKQNCL RLIRTINNFI DANKISEGQI EENVMVLNVV EVVENILDAS SEYISKKKIN FVFDPDFEEI FIAIDSEFLE RIILNLLSNS VKYGSENGNI YVKIYFEGKD LVIMIENDGI AISYDEQKYI FDKFTKSNKA LNRTQEGSGL GLYISKSLMK MQGGDLKVDI YEGHGNRFKL YFYDVDLFKE TDRTEHIFNN NYYNLKERAE IEFSDIYI
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