| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2224 |
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| Symbol | potB |
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| ID | 4201714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2471834 |
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| End bp | 2472679 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083089 |
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| Product | spermidine/putrescine ABC transporter, permease protein PotB |
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| Protein accession | YP_696648 |
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| Protein GI | 110800670 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA GAAATAAAAA TTTATCATTT GCAGCTTATC CATACGTTGT ATGGAGTGCT
ATATTCATAG TTATCCCTTT ACTTTTAATA GTTTTCTTTA GTTTTACAAG TAAAGTTGAC
GGAAGATTTG TTTTCTCTTT TGAAAACTTC CAAAGATTAT TTGAGCCAAT ATATTTTACT
GTTTTTATAC GTTCTATATG GCTTGCTGTT TTATCAACAG TTTCATGTTT AATTTTAGGT
TATCCAATAG CTTATATAAT TTCTAAATTA CCTATAAAAA GAAGAAATAT GTTAATACTT
TTATTCATAT TACCAATGTG GATGAACTTC TTACTTAGAA CATATGCGTG GATGGCTATA
CTTGGTAGAG ATGGACTTAT TAATACTCTT TTAGGTTATA TAGGAATAGG TCCAATTAAA
ATGCTATATA CTGACGGAGC AATCTTACTT GGAATGGTAT ATAACTTCTT ACCATTTATG
GTTATACCAA TATATACTGT ACTTATAAAA ATTGATAAAA ACTTAGTTAA TGCAGCTTAT
GACTTAGGTG CAAATAAAGC TCAAGCTTTT AGAAAAATTA TTTTACCACT TAGTATTCCT
GGAATAATCT CTGGAATAAC TATGGTATTT ATGCCAGCTG TTTCAAACTT CGTAATCCCA
AGCCTTCTAG GTGGTGGAAA ATACATGTTA GTTGGTAACC TTATAGAACA ACAATTTACT
ACTATTGGTA ACTGGAACTT TGGTTCTGCT TTATCAATCT TTATGATGAT ATTAATATTA
ATTTCAATGG CCTTTATGTC TAAATATGAA AAGAACGGAA AAGAAGGAGG TAAACAGCTA
TGGTAA
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| Protein sequence | MKNRNKNLSF AAYPYVVWSA IFIVIPLLLI VFFSFTSKVD GRFVFSFENF QRLFEPIYFT
VFIRSIWLAV LSTVSCLILG YPIAYIISKL PIKRRNMLIL LFILPMWMNF LLRTYAWMAI
LGRDGLINTL LGYIGIGPIK MLYTDGAILL GMVYNFLPFM VIPIYTVLIK IDKNLVNAAY
DLGANKAQAF RKIILPLSIP GIISGITMVF MPAVSNFVIP SLLGGGKYML VGNLIEQQFT
TIGNWNFGSA LSIFMMILIL ISMAFMSKYE KNGKEGGKQL W
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