Gene CPF_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2213 
Symbol 
ID4203753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2459313 
End bp2460215 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content27% 
IMG OID638083078 
Productnucleotidyltransferase domain-containing protein 
Protein accessionYP_696637 
Protein GI110799971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.462886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGAAA TAATATTGAA ATATCAAAAT TCTTTTAAAT CAGTTATAAA TGACCTTCAA 
AAGAATGAGG ATGTTATTGG AGTGACGGCA TTTGGAAGTA TAATAAATGG AGATATATGG
GAAGGGTCAG ATATAGATTT ATTTGTTATT GTAAATGGAG ACTTTAAAGG GGTAAAGGAT
GTTTATGGTG AGGAACTAGG CGTATCTTTA CATTTAAAAA TAGTATCTAA AAAGTTTCTA
GTTAATTTCT GTCAAGAAGA AATAACAGGA AGCACAATAC ATAGAAAATT TATATCTTCA
AAATTAATTT TTTGTAAGGA CCAAGAAATA TCAGATAAAT TTACTTCAAT AAAATATTAT
ACAGATGCTC ATAGTGAAAA GTGGAATCTT GTTTATTTAA GTGAGCTTTT ACAAGATATG
AATTTATATA AAAAATGTAT TCATAATGAA CATTTCTACG CTGCCTTTGA GGCTCTTATG
TATTCAGTGG ATAGTTTTAG TAGGCTGTAT TTAAACTTTA ATGGATATTT AATAACAAAA
AGCTCTACTG GTATGCTTAT GAAATTAGAT GAAAACTTTG AGAAAATGGT TAATGGAATA
TTCAAAGCAG CAAATAAACA GGCTTTAGAA TATGTACATT TTTATATTGA AAGCTTCTTA
GAGAGAAATA TTAGAGGAAT AATAAGAGCT TTAGTTGATT TTATGAAAAA ACAAAAGGAT
TATTTAAGCT CAGAAGAAAT AAAAAAATCA GAAGAATTCC AAGGCTTTAA AATAGATTTT
GAGGAATTAT TAGGATATCT TTATAAGAAA AATATAGTTA AGAAAAGTGG AAGAGAGAAA
TTCTCACCCT GTGGACAAAA GCTTACAACA GAAAAAGTAT ATTTAATAAA AGATAATGTT
TAA
 
Protein sequence
MSEIILKYQN SFKSVINDLQ KNEDVIGVTA FGSIINGDIW EGSDIDLFVI VNGDFKGVKD 
VYGEELGVSL HLKIVSKKFL VNFCQEEITG STIHRKFISS KLIFCKDQEI SDKFTSIKYY
TDAHSEKWNL VYLSELLQDM NLYKKCIHNE HFYAAFEALM YSVDSFSRLY LNFNGYLITK
SSTGMLMKLD ENFEKMVNGI FKAANKQALE YVHFYIESFL ERNIRGIIRA LVDFMKKQKD
YLSSEEIKKS EEFQGFKIDF EELLGYLYKK NIVKKSGREK FSPCGQKLTT EKVYLIKDNV