Gene CPF_2204 details

Gene Information

• Locus tag: CPF_2204
• Symbol: ruvA
• ID: 4203360
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2444620
• End bp: 2445225
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638083069
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_696628
• Protein GI: 110800505
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGAAT ATATAAGAGG CCAATTTCAA GGGATAAGTA AGGATTATGT TGTAATAGAA 
TTAAATAATA TAGGATATAA AATTTTCACA TCTGGAAATA CAATGTCTAA TATGCCAAAA 
GTGGGAGAGG AAGTTCTTCT ATATCTAGAG CAGATCGTTA GGGAAGATTT CATAGGTCTA 
TATGGATTTA CAACAAGAGA AGAATTAGAA ATGTTTAAGC TTTTATTATC CATAAATGGA 
GTAGGAGCAA AAGCTGCTTT ATCACTTTTA TCAATTAGTA CTGTTAATAA TTTAAAGTAC 
GCAATAATGA TGGGAGATGA AAAGCATATA ACAAGAGCAC CTGGAATAGG AAAGAAAACG 
GCTCAAAGAA TTATTCTAGA GCTTAAGGAT AAGTTAAAAC CAGATGAACT TACTTCTGAA 
GAGGGAGAAT TAATAGAAGG AATTAATGAT AATTCTGATT ATAGTTTCAA TATAAATGAA 
ACATTAAGTG CCTTAATGGC ATTAGGATAT ACAGAGAAGG AAGCTCAAAA AGCTTTAGAA 
AAAGTTGATA AGACATTATC TATAGAAAAT ATGATAAAGG AGTCTTTAAA ACTTTTAATG 
CGTTAG 

 

Protein sequence

MYEYIRGQFQ GISKDYVVIE LNNIGYKIFT SGNTMSNMPK VGEEVLLYLE QIVREDFIGL 
YGFTTREELE MFKLLLSING VGAKAALSLL SISTVNNLKY AIMMGDEKHI TRAPGIGKKT 
AQRIILELKD KLKPDELTSE EGELIEGIND NSDYSFNINE TLSALMALGY TEKEAQKALE 
KVDKTLSIEN MIKESLKLLM R