Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2203 |
Symbol | ruvB |
ID | 4201457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2443566 |
End bp | 2444606 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638083068 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_696627 |
Protein GI | 110799933 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAA GATTAGTTAC CTCTAATGAG ATTGGAATAG ATTCAACTAA TGAATACAGT TTGAGACCAG AGAAAATAAA TGAATATATA GGTCAAGATA AAGTTAAAGA AAGACTAAAC ATATTCATAA AAGCTGCTCA AAGAAGAGAG GAAGCCTTAG ATCATGTAAT TTTATATGGG CCACCAGGTC TTGGAAAGAC AACATTAGCT AATATAATAG CAAATGAAAT GGGTGGAAAT CTTAAAATAA CATCAGGGCC TGCTATTGAA AGAGCAGGAG ATTTAGCGGC AATATTAACA ACCTTAAACA CTAATGATGT TTTATTTATT GATGAGATAC ATAGATTAAA TAGAAGTGTA GAGGAAATAC TATATCCTGC CATGGAGGAT TATGTTTTAG ATATAATTAT TGGTAAAGGG GCTGCTAGTA AATCCATAAG ACTCGATTTA CCTAAATTTA CTCTAATAGG TGCCACAACT AGAATTGGTA TGCTTAGTTC ACCTTTAAGA GATAGATTTG GGGTTTTATG TTCTATGGAA TATTATACTG ATGAACAATT AAAGGAAATA ATAATTAGAA GTGCTGAAAT TTTAGGATGC CATATAACTG AAGAAGGGGC CTTTGAAATT GCTAAAAGGT CAAGGGGTAC TCCTAGAATA GCAAATAGAC TTTTAAAGAG AGTAAGAGAT TTTGCAGAAG TTTTATATGA TAATGAAATT ACAGAAGAGG CTGCAAAAAA ATCCTTAGAG ATTTTAGAAG TTGATGGAGA AGGCTTTGAT AGAATTGATA ATAAAATTCT AGAAGCCATA ATAGATAACT TCAATGGAGG GCCAGTAGGG ATAGAAACCT TAGCTTACTT CGTTGGAGAG GAATTAGATA CTATAGAAGA TGTTTATGAG CCATATCTTC TACAAAAAGG GTTTATAGTT AGAACTCCAA GGGGAAGAAT GGCAACAGAT AAAGCATATA AACACTTAGG AAGAGTTAGA TTTAATGAAT CTAAGATAGA TTCTAAACAG TGTACGTTAT TTGAAAAATA A
|
Protein sequence | MSERLVTSNE IGIDSTNEYS LRPEKINEYI GQDKVKERLN IFIKAAQRRE EALDHVILYG PPGLGKTTLA NIIANEMGGN LKITSGPAIE RAGDLAAILT TLNTNDVLFI DEIHRLNRSV EEILYPAMED YVLDIIIGKG AASKSIRLDL PKFTLIGATT RIGMLSSPLR DRFGVLCSME YYTDEQLKEI IIRSAEILGC HITEEGAFEI AKRSRGTPRI ANRLLKRVRD FAEVLYDNEI TEEAAKKSLE ILEVDGEGFD RIDNKILEAI IDNFNGGPVG IETLAYFVGE ELDTIEDVYE PYLLQKGFIV RTPRGRMATD KAYKHLGRVR FNESKIDSKQ CTLFEK
|
| |