| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2201 |
|---|
| Symbol | tgt |
|---|
| ID | 4202383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2441353 |
|---|
| End bp | 2442495 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638083066 |
|---|
| Product | queuine tRNA-ribosyltransferase |
|---|
| Protein accession | YP_696625 |
|---|
| Protein GI | 110799191 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA AAAGATATAC TCTTTTAAAA AAAGACGGAA AAGCTAGAAG GGGTGAGTTT
GTAACTCCTC ACGGTACAAT TCAAACTCCT GTTTTTATGA ATGTAGGAAC TTTAGCAGCT
ATAAAAGGTG CTGTTTCTTC AATGGATTTA AAAGAAATAG GATGTCAAGT AGAGCTTTCT
AATACATACC ATTTACATTT AAGACCAGGA GATAAGATTG TAAAGCAAAT GGGAGGCTTA
CATAACTTTA TGAATTGGGA TAGACCAATC TTAACAGATT CAGGTGGATT CCAAGTTTTC
TCATTAGCAG GAATGAGAAA GATAAAAGAA GAGGGAGTTT ATTTTAACTC ACACATAGAT
GGTAGAAAAA TATTCATGGG ACCAGAAGAA AGTATGCAAA TACAAAGTAA TTTAGGTTCA
ACAATAGCTA TGGCTTTTGA TGAATGTATT CCAAATCCAT CAACTAGAGA ATATGTAGAA
AAGTCAGTTG CAAGAACAAC AAGATGGCTT GAAAGATGTA AAAAAGAAAT GGATAGATTA
AATTCATTAG ATGACACTGT TAATAAAGAG CAAATGCTTT TTGGTATTAA CCAAGGTGGA
GTTTATGAAG ATATAAGAAT AGAACATGCT AAAACTATAA GAGAAATGGA TTTAGATGGA
TATGCTATTG GAGGATTAGC GGTTGGAGAA ACTCATGAAG AAATGTATAG AGTTATAGAT
GCTGTAGTTC CTCACTTGCC AGAGGATAAA CCAATATATT TAATGGGGGT TGGTCTTCCA
TCAAATATAT TAGAAGCAGT AGAAAGAGGA GTAGACTTCT TTGATTGTGT TTTACCTGCT
AGAAATGGAA GACATGGTCA TGTTTTCACT AAAGAAGGTA AAATAAACTT AATGAATGCT
AAGTTTGAAT TAGATGCTAG ACCAATAGAT GAAGGATGTC AATGTCCTGC ATGTAAAAAT
TACACAAGAG CATATATAAG ACACTTATTT AAGGCTAAAG AAATGTTAGC TATGAGATTA
TGTGTTCTTC ACAATCTATA CTTCTATAAT AAGCTTATGG AGGATATAAG AGATGCTATA
GATGGCGGAT ACTTTGCAGA ATTCAAAGCT AAAAAATTAG AAGAGTGGAA TGGAAGAGCT
TAA
|
|---|
| Protein sequence | MTKKRYTLLK KDGKARRGEF VTPHGTIQTP VFMNVGTLAA IKGAVSSMDL KEIGCQVELS
NTYHLHLRPG DKIVKQMGGL HNFMNWDRPI LTDSGGFQVF SLAGMRKIKE EGVYFNSHID
GRKIFMGPEE SMQIQSNLGS TIAMAFDECI PNPSTREYVE KSVARTTRWL ERCKKEMDRL
NSLDDTVNKE QMLFGINQGG VYEDIRIEHA KTIREMDLDG YAIGGLAVGE THEEMYRVID
AVVPHLPEDK PIYLMGVGLP SNILEAVERG VDFFDCVLPA RNGRHGHVFT KEGKINLMNA
KFELDARPID EGCQCPACKN YTRAYIRHLF KAKEMLAMRL CVLHNLYFYN KLMEDIRDAI
DGGYFAEFKA KKLEEWNGRA
|
|---|
| |