Gene CPF_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2186 
Symbol 
ID4203325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2426233 
End bp2426754 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content31% 
IMG OID638083051 
Producthypothetical protein 
Protein accessionYP_696610 
Protein GI110801248 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTTAA TTAAAGAAGT TCTAGCTACC TTCATAGCTA CTATAGCTTT TGGAGTATTA 
TTTAATATTC ACGGAAAGAA TTTATTCTTT GCCGGAATAG GTGGAGCCTT AGGGTGGCTA
GTTTATAAAA TAGGATTATA TTTTGGACTA AGTGTCATAT TATCAATGTT CTTTTCAGCA
ATTGCCTTTA GTGCTTATTC TGAAATATAT GCAAGAATTT TAAAAACTCC AGTAACCACA
ATAGTTGTTT GTGCCTTAAT CCCCTTAGTT CCTGGAGGGG GCATGTATAA TACTATGTAC
GAAGCTATAA AGGGAGATGC TATGTCAACT TGGAATCAAG CCATAATGAC AATTTCATCT
TCAGGCGCAT TAGCCTTAGG AGTTTTATTT GTATCTACAA TCACTCGTTT AATAAACAAT
AGAAAAAAAC AATATACTCA TGGATCATTA AATCCTAAAA ACATATTATT ATTTAAAAAA
TTAAAAAACA AAAGCAATAT AGATTTTCAT ACAAAAAAAT AG
 
Protein sequence
MVLIKEVLAT FIATIAFGVL FNIHGKNLFF AGIGGALGWL VYKIGLYFGL SVILSMFFSA 
IAFSAYSEIY ARILKTPVTT IVVCALIPLV PGGGMYNTMY EAIKGDAMST WNQAIMTISS
SGALALGVLF VSTITRLINN RKKQYTHGSL NPKNILLFKK LKNKSNIDFH TKK