Gene CPF_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2181 
Symbol 
ID4202690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2420212 
End bp2421735 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content27% 
IMG OID638083046 
Productsensor histidine kinase 
Protein accessionYP_696605 
Protein GI110799592 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.547096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA GTATTTCAAA AAGATTATTT ATAATAACTT TTGGTATAAT AATATTCTTA 
ACCTTGTTTA CAATGATATT CCAAATTACA TTTTTCCAAG AATTTTATTA TAAAAGAAAA
AGTAATGATT TAAGCAATGC AGTTTTAAAG TTTAGAGCTC TATATTCTTA TGACATAAAA
AATACAGACT CTTTATATAG GGCTTTAAGC CTTTTTGAAC TTGAAAACAA CGCTAAAATA
GGAATTTATT CCATAGATAG TACACCAAAA TATGTTCCTG ATCCAGCTAA TAAAAACTCA
GAGGCTGTAG ATTTATTAAA CGATATTTTT AATGAGTTAT ATAGTGACCA GGATTTTGCA
AAAACCTTAT TAAATTCAAA TTCTGGAGTA ACTACAGAAT TTAAAAGCAG AAAATACTCA
ACAAAATATA TTGTTTATAT GGTGCCATTT TCTCTTAATT CTAAGAACGA TTCTATTATT
ATAGCCATAA CATCATTCCA AGCAATTGAA GAAGCAAGCG CCTTAATAAA GGATTTTTAT
AAATACATAA TTCTTATAGT CATAGTGATT GGATTAATTT TATCCTATGT ATTTTCAAAC
TTAATTTCTA AACCTCTAGT GAAATTAAAT AAATCTGCAA AGAAAATGAG TGCTATGGAC
TTCTCTGAAA AGTGTGATAT AGAACGTGAA GATGAAATAG GAAATCTAGC TAAAACTTTA
AACTTTTTGT CTAAAAATCT ATCTAATGCC TTAGATGATT TAAAAATAAA AAATAAAAAG
TTAGAAGAAG ATATAGAAAA AGAAAGAGAA CTAGAAAAAC TTAGAAAAGA TTTTATTGCT
GGAGCATCCC ATGAACTTAA AACTCCTATT GGTATAATAT CTGGATATGC TGAAGGAATA
AAAGACGGTA TAGTGGATCA TAAGGATCAA GGAGTTTACT TAGATATAAT AATTGATGAA
GCAGAAAAAA TGAACAAATT AGTTATGGAT ATGCTTGAAC TTTCAAAGCT TGAAGCTGGA
AAAATTGATT TACATATAAT AGATTTTTCC CTTACTGAAC TTACTGAGGA AGTTTTAGTA
AAGAATTCTG TTGACATAAA TAAAAATAAT TTAACTGTAG TAAAAAATTA TTCTCCTACT
GAAGATTTAT ATGTTCAAGG AGATGACTTT AAAATAGAAC AGGTACTAAC TAATTTTGTT
ACCAATGCTA TAAAATATTC TGAACCTAAC AACCAAATAA TAATAGATAT AAAACCAGTT
GAGGAAGATA AAATATACTT CTCAATTGAA AATACCGGTG CCCATATTCC TGATTCAGAT
ATAAATAAGA TTTGGACTCA ATTTTATAGA GGAGATACCT CAAGAAATAG AGGCTCTAGA
AGTACGGGAC TGGGACTATC CATAGTTAAA AATCTACTTC AAGCTCACGA AAGTGAATTC
GGAGTTATGA ATACAGAAAA CGGAGTTAAA TTCTACTTTA CCCTAAAAAA ATCTAAAGAA
ATAGATGAAG TAGAAGAAAT CTAA
 
Protein sequence
MKKSISKRLF IITFGIIIFL TLFTMIFQIT FFQEFYYKRK SNDLSNAVLK FRALYSYDIK 
NTDSLYRALS LFELENNAKI GIYSIDSTPK YVPDPANKNS EAVDLLNDIF NELYSDQDFA
KTLLNSNSGV TTEFKSRKYS TKYIVYMVPF SLNSKNDSII IAITSFQAIE EASALIKDFY
KYIILIVIVI GLILSYVFSN LISKPLVKLN KSAKKMSAMD FSEKCDIERE DEIGNLAKTL
NFLSKNLSNA LDDLKIKNKK LEEDIEKERE LEKLRKDFIA GASHELKTPI GIISGYAEGI
KDGIVDHKDQ GVYLDIIIDE AEKMNKLVMD MLELSKLEAG KIDLHIIDFS LTELTEEVLV
KNSVDINKNN LTVVKNYSPT EDLYVQGDDF KIEQVLTNFV TNAIKYSEPN NQIIIDIKPV
EEDKIYFSIE NTGAHIPDSD INKIWTQFYR GDTSRNRGSR STGLGLSIVK NLLQAHESEF
GVMNTENGVK FYFTLKKSKE IDEVEEI