Gene CPF_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2179 
Symbol 
ID4203191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2418202 
End bp2419446 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content28% 
IMG OID638083044 
ProductM16 family peptidase 
Protein accessionYP_696603 
Protein GI110799529 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0524526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAT GGACATTTGA TGAAAATACC ATAATTTTAC CCAATGGGCT AAAAGTTATA 
ACAATAAAAA AAGATACAAG GTTAGCATCT ATAAATATTG GTGTTAATAT AGGATCTTTA
TATGAAGACG AAAAAGAATT AGGCATGAGC CATTTTGTAG AGCACATGCT TTTTAAAGGA
ACAAAGAATA GAAGTAATGA ACAATTAAAT AGAGAATTAG AATTTTTAGG TGGAGATTAT
AATGCATATA CAGATTATAT TTCAACAGTA TATAGCATTA CTTGTCTAGA TGAAGAATTT
GAAAAGGGAA TAGAACTTTT AAGTGATATG GTTTTAAATT CTTCCTTTGA TGAAAAAGAG
ATGAAAAAGG AAAAGGGCGT TGTTTTATCA GAGATAAAAA GTGATAAGGA TGATATTGAA
GATTTAAGTA TTAGCAGAAC TCATGAATAT GCCTTTGATA AATCAGCACT TAGAAATTCT
ATTGCAGGAA CTGAAGAACA TGTTAAGGGC TTTAAAAGAA AGCAGGTTTA TGATTTTTAT
AAAAAATATT ATACTCCTGA TAATTGTGTT ATTGTAACTG TAAGTGCCTT TAGTCATGAA
CAAATGCAAA AAATAATAAC AGACTTATTT GGAAAGTGGG AAGGAAAATC TCATAAAAAG
GCTAAAATAA TAAAAGAAGA AAATAAAGAC ATAGTAAAAA CAACTTACAA ATCTCAAATA
GAGCAAGGAA CTGTTACTTA TCTTTATGCA TTTAAAGAGG TTTGTGAAAA AGATAAACTT
CCATTAAAGA TATTAAGTTA TAAACTAGCT GAAAGTTCAA ACTCAATATT ATTTAGAGAG
CTTAGAGAAG AACGTGGATT AGCTTATGAT GTATATAGTC AAATGGATTT AGACGAAAAT
GTAAATACAA TGAATATTTT TACCTCAGTT AGAGAAGAAT CCATAGATGA GGTAATAGAA
GTAATAGACA AAGCTATATT AGACATAAAA AATAAAGATA TAAACTTTGA TGAAGATATG
CTTTGTATGA TGAAAAAGAC TCATAAGACA GGAGTAGTTT CTACTTTAGA AGATTGTAGC
AGTTTATGCA GTTATGTATT AGTTCAAAGC TTAGCTGGAA AAGATATAAC TGAGTTTATA
AATAGCATGG AAGAACTAGA AACTTTAACT GGAGAAGATA TCTATAGGGT TTGTAATAAA
TATTTGAATA AGCCTACTAT ACACATATTA AAACCAATGG AGTAG
 
Protein sequence
MKRWTFDENT IILPNGLKVI TIKKDTRLAS INIGVNIGSL YEDEKELGMS HFVEHMLFKG 
TKNRSNEQLN RELEFLGGDY NAYTDYISTV YSITCLDEEF EKGIELLSDM VLNSSFDEKE
MKKEKGVVLS EIKSDKDDIE DLSISRTHEY AFDKSALRNS IAGTEEHVKG FKRKQVYDFY
KKYYTPDNCV IVTVSAFSHE QMQKIITDLF GKWEGKSHKK AKIIKEENKD IVKTTYKSQI
EQGTVTYLYA FKEVCEKDKL PLKILSYKLA ESSNSILFRE LREERGLAYD VYSQMDLDEN
VNTMNIFTSV REESIDEVIE VIDKAILDIK NKDINFDEDM LCMMKKTHKT GVVSTLEDCS
SLCSYVLVQS LAGKDITEFI NSMEELETLT GEDIYRVCNK YLNKPTIHIL KPME