| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2162 |
|---|
| Symbol | dapB |
|---|
| ID | 4203611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 2399171 |
|---|
| End bp | 2399935 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638083027 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_696586 |
|---|
| Protein GI | 110800271 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.528738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAG TTATATTAAA TGGTTGTTCA GGAAAAATGG GTAGCGTAAT TTCAAACTTA
GCTGAAACAA AATTTCCTAA TGTTGAAATA GTTGCTGGTA TAGATAATAA CACTAAGGCT
CAAAGACCTT ACCCAATCTT TGCAAAACCA GAAGATTGCA ATGTTTCCTA TGATGTATTA
TTAGATTTTT CAAGAGCTGA TGCTTTAAAA AGCTTAGTAG AATTTTCAAA GAAAACTAAA
AAACCACTTA TACTATGTTC AACAGGATAC ACTGCTGAAG ACTTAAAATT TATAGAAGAA
TCTTCAAAAG AAATCCCTCT ATTTAGATCT GCTAACATGA GCATAGGTAT TAATTTAGTA
AATAATTTAT TAAAGAAAGT AGCTCCAGTT CTTTATGAGA ACTTTGATAT AGAACTTGTA
GAGAGACATC ACAATCAAAA AGTTGATGCT CCAAGTGGAA CTGCCCTTTT ATTAGCTCAT
ACTATTCAAG ATTCTCTTAA GGAAGAAACA AAATTACTTT ACGGAAGAGA AGGAATTGCT
AAAAGAGAAA AAAATGAAAT CTGTGTAAAT ACAGTAAGAG GTGGCGGAAT AATAGGAGAC
CACGAAGTTA TTTTTGCTGG TGATGGTGAA GTTATAGAAA TAAATCACAA AGCTATTTCA
AGAGATGTTT TCGCTATAGG TGCTTTAAAA GCATGTGAAT ACATGGCTGA TAAAACTAAA
GCTGGAAAAT ACTCAATGGA TGATGTTTTA CAACTAAACT TCTAA
|
|---|
| Protein sequence | MVKVILNGCS GKMGSVISNL AETKFPNVEI VAGIDNNTKA QRPYPIFAKP EDCNVSYDVL
LDFSRADALK SLVEFSKKTK KPLILCSTGY TAEDLKFIEE SSKEIPLFRS ANMSIGINLV
NNLLKKVAPV LYENFDIELV ERHHNQKVDA PSGTALLLAH TIQDSLKEET KLLYGREGIA
KREKNEICVN TVRGGGIIGD HEVIFAGDGE VIEINHKAIS RDVFAIGALK ACEYMADKTK
AGKYSMDDVL QLNF
|
|---|
| |