Gene CPF_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2160 
Symbolasd 
ID4202056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp2397221 
End bp2398198 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content31% 
IMG OID638083025 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_696584 
Protein GI110799503 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACAATG TAGCAATAGT TGGGGCAACA GGAAATGTTG GAAGAAAATT CCTTGAAATC 
CTAGAAGAAA GAAATTTCCC CGTTAAAGAA TTATATTTAT TCGCATCAAA AAGATCAGCA 
GGAAAAACTT TAAAATTTAA AGGTGAAGAT GTATTAGTTG AAGAATTATG CGAAGCTAAT 
ATTGAAAACA AGAAAATAGA TTTTGCATTA TTCTCAGCAG GCGGAAGTGT AAGCTTAGAA 
TTTGCTCCTA TTTTCGCAAA ACATGGAGCA GTGGTTATAG ATAACAGTAG TGCTTGGAGA 
ATGGATAAAG AAGTTCCTTT AGTAGTGCCA GAAGTAAATC CAGAGGATGT AAAATGGCAT 
AAAGGTATTA TTGCTAATCC AAACTGTTCT ACAATTCAAG CTATGGTAGC TTTAAAGCCA 
CTATATGATA AATATGGTAT AAAAAGAATA GTTTACTCAA CTTACCAAGC AGTTTCAGGA 
GCTGGAATTC AAGGTATATT AGATTTACAA GAAGGAACTA CAAAGAAATT CCCATATCCT 
ATATTAGGTA ATGTAATTCC TCATATAGAT GTATTCTTAG ATAATGGATA CACAAAAGAA 
GAAATTAAAA TGATTGAAGA AACAAAGAAA ATACTTCATG ATGATAATTT AAGAATAACT 
GCTACTACAG TTAGGGTACC AGTTTTAAAT GCTCATAGTG AAAGTATAAA TGTAGAGCTT 
AATTCTGAAT TTGAACTTGA AAATGTTATA GATTTATTTA ATAGTTCTAA AGGAATAATA 
GTTCATGATG ATGTAGAAAA CTTAAAATAC CCTACTCCAC TTGAACTTAG TGGAAAAGAT 
GAGGTCTTTG TTGGAAGAAT AAGACGTGAT TTCAGCTTAG ATAATGGTCT TAACCTTTGG 
GTTGTGGCTG ATAATATAAG AAAAGGGGCA GCTCTTAATG CAATTCAAAT TGCTGAAATA 
CTTATAAACG AAAAATAA
 
Protein sequence
MYNVAIVGAT GNVGRKFLEI LEERNFPVKE LYLFASKRSA GKTLKFKGED VLVEELCEAN 
IENKKIDFAL FSAGGSVSLE FAPIFAKHGA VVIDNSSAWR MDKEVPLVVP EVNPEDVKWH 
KGIIANPNCS TIQAMVALKP LYDKYGIKRI VYSTYQAVSG AGIQGILDLQ EGTTKKFPYP 
ILGNVIPHID VFLDNGYTKE EIKMIEETKK ILHDDNLRIT ATTVRVPVLN AHSESINVEL 
NSEFELENVI DLFNSSKGII VHDDVENLKY PTPLELSGKD EVFVGRIRRD FSLDNGLNLW 
VVADNIRKGA ALNAIQIAEI LINEK