Gene CPF_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2150 
Symbol 
ID4201120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2392552 
End bp2393106 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content28% 
IMG OID638083015 
ProductNUDIX family hydrolase 
Protein accessionYP_696578 
Protein GI110798783 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.290696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AGGATATAAA AAAATTAACT GATTGCAAGT TTTTAAACTT ATATAAATTA 
GATATTGAGA ATAAGGTTGG AAATTCTAAG GAATACTTTA TAGCAAGTAG AAGAACAGAA
AAAGATTTAA GCTGTGTTGT AAATAAACAT GATAAGGCAG ATGGTGTTAT GATAATTCCA
ATAACAGAAA ATGATGAGTT TGTTCTGTTA AAGCAATTTA GACCTGCTAT AAATGATTAT
ATATATGAAT TCCCAGCTGG ACTTATAGAC AATGGAGAAG ATGCAATAAA GGCTGCTACA
AGAGAGCTTT TTGAAGAAAC TGGACTTTTA GCTAGTGAAA GTGAATATTT AATAAAGCCT
AGCTATACGT CAGTAGGTAT GTCTGATGAA TCTGTAGCTG TGGTTAAAAT GAAGGTTTAT
GGAACTATTT CAATAGAAAA TTTAGAAGAA AATGAAGAAA TAGAAGTTAT TAAAGTGCCT
ATAAAAGAGG CTAAAAACTT TGTTAAAGAA AATAATGTAT CAATAAAAAC TGCATTGGTT
TTAAGCTTTA TGTAG
 
Protein sequence
MKIKDIKKLT DCKFLNLYKL DIENKVGNSK EYFIASRRTE KDLSCVVNKH DKADGVMIIP 
ITENDEFVLL KQFRPAINDY IYEFPAGLID NGEDAIKAAT RELFEETGLL ASESEYLIKP
SYTSVGMSDE SVAVVKMKVY GTISIENLEE NEEIEVIKVP IKEAKNFVKE NNVSIKTALV
LSFM