| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2144 |
|---|
| Symbol | rplT |
|---|
| ID | 4201558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2388066 |
|---|
| End bp | 2388425 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638083009 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_696572 |
|---|
| Protein GI | 110800475 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000208623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG TTAAGAGAGC GGTAAATGCT CGTAAAAATC ATAAAAAAGT TTTAAAACTT
GCAAAAGGAT ACTATGGTGG AAAAAGCAAG TTATTCAAAA CTGCTAACGA ATCAGTAATA
AGAGCATTAA GAAATGCTTA CGTTGGAAGA AGATTAAAGA AGAGAGACTA CAGAAGATTA
TGGATAGCTA GAATAAACGC AGCTACAAGA ATGAACGGTC TTTCATATTC AAGATTCATG
AACGGAATGA AATTAGCTGG TGTTGATATA AACAGAAAAA TGCTTTCAGA GATAGCTATA
AATGATCCAA AAGCATTTGC TGATTTAGTT GAATTAGCTA AAAAGCACTT AAACGCTTAA
|
|---|
| Protein sequence | MARVKRAVNA RKNHKKVLKL AKGYYGGKSK LFKTANESVI RALRNAYVGR RLKKRDYRRL
WIARINAATR MNGLSYSRFM NGMKLAGVDI NRKMLSEIAI NDPKAFADLV ELAKKHLNA
|
|---|
| |