Gene CPF_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2142 
Symbol 
ID4202680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2385809 
End bp2386474 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content30% 
IMG OID638083007 
Productputative potassium uptake protein 
Protein accessionYP_696570 
Protein GI110799583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.897368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTA AACAATTCGT TATTATAGGA TTAGGAAGAT TTGGATCATC AGTAGCTAAA 
ACTTTATATG CTTTAGGTCA TGATGTTTTA GCAATTGATT CTAATGAGGA TTTAGTTCAA 
GAAATATCAG ATAGTGTAAC TCATGCAGTT CAAATGGATG CAACAGATGA AAATGCTTTA 
AGAACTTTAG GATTAAGAAA TTTTGATGTG GCTGTAGTTA CAATAGGAGC TAACATACAA 
GCAAGTGTTA TGGCAACATT ACTTGTAAAA GATATGGGAA TAAAATATAT AATTGCTAAG 
GGAAATAGTG ATTTACATGC TAAAGTTTTA TATAAAATAG GAGCAGACAG AGTAATCTTA 
CCTGAGAAGG ATATGGGAGT TAGAGTAGCT CACAACTTAG TTTCTTCAAG CATCTTAGAT 
TATATAGAAT TATCTCCAGA TTATTCTATA ATTGAAATAG AAAGTCCAAA AGAGTGGTAT 
GGAAAGTCTA TGAAAGAATT AAGCTTAAGA AGTAAATACG GAATAAACGT AATGGCTATT 
AAGAGAAACA ATGAAGTTAA TATATCTCCA GATGCAGATG ATGTTATTAA TAAGGATGAC 
ATAGTAGTTG CTATAGGTTC TGCAGAGGAT TTAACAAAAT TAGAAGGAAA GATATTTAGA 
CATTAA
 
Protein sequence
MSSKQFVIIG LGRFGSSVAK TLYALGHDVL AIDSNEDLVQ EISDSVTHAV QMDATDENAL 
RTLGLRNFDV AVVTIGANIQ ASVMATLLVK DMGIKYIIAK GNSDLHAKVL YKIGADRVIL 
PEKDMGVRVA HNLVSSSILD YIELSPDYSI IEIESPKEWY GKSMKELSLR SKYGINVMAI 
KRNNEVNISP DADDVINKDD IVVAIGSAED LTKLEGKIFR H